RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 NEDD1Q8NHV4 660 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 RFWD2Q8NHY2 731 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 ZNF564Q8TBZ8 553 aaPredicted RBP17.16■□□□□ 0.34
CHD1L-203ENST00000369259 NAT14Q8WUY8 206 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 DYDC2Q96IM9 177 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 IWS1Q96ST2 819 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 DNM3Q9UQ16 869 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 MYO3BQ8WXR4 1341 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 UBAP1LF5GYI3 381 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 TYROBPO43914 113 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 RRM1P23921 792 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 KLRK1P26718 216 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 SH2D4BQ5SQS7 431 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 ZNF746Q6NUN9 644 aaPredicted RBP17.16■□□□□ 0.34
CHD1L-203ENST00000369259 LVRNQ6Q4G3 990 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 CEP128Q6ZU80 1094 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 CATSPER3Q86XQ3 398 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 NME8Q8N427 588 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 ZNF526Q8TF50 670 aaPredicted RBP17.16■□□□□ 0.34
CHD1L-203ENST00000369259 LZICQ8WZA0 190 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 RBM17Q96I25 401 aaKnown RBP17.16■□□□□ 0.34
CHD1L-203ENST00000369259 FNBP1Q96RU3 617 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 NAP1L4Q99733 375 aaKnown RBP17.16■□□□□ 0.34
CHD1L-203ENST00000369259 RUSC1Q9BVN2 902 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 NUP85Q9BW27 656 aa17.16■□□□□ 0.34
CHD1L-203ENST00000369259 FRMPD2Q68DX3 1309 aaPredicted RBP17.16■□□□□ 0.34
CHD1L-203ENST00000369259 RSPH10B2B2RC85 870 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 F8W8V4 182 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 DNAJC6O75061 913 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 ASLP04424 464 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 RSPH10BP0C881 870 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 BCRP11274 1271 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 ESRRAP11474 423 aaPredicted RBP17.15■□□□□ 0.34
CHD1L-203ENST00000369259 ANPEPP15144 967 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 RFX1P22670 979 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 AMPD1P23109 780 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 CRABP2P29373 138 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 PGM1P36871 562 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 CCNFP41002 786 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 PPP2R5CQ13362 524 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 MAPK6Q16659 721 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 PPP1R18Q6NYC8 613 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 KSR1Q8IVT5 923 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 MARCH10Q8NA82 808 aaPredicted RBP17.15■□□□□ 0.34
CHD1L-203ENST00000369259 PPP2R3CQ969Q6 453 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 MKNK1Q9BUB5 465 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 DCLK3Q9C098 648 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 LRRC4BQ9NT99 713 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 ETNK2Q9NVF9 386 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 POC1B-GALNT4F8VUJ3 575 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 MEIS1O00470 390 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 DESP17661 470 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 RAP1GDS1P52306 607 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 MYL7Q01449 175 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 KRT72Q14CN4 511 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 DBN1Q16643 649 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 CCDC62Q6P9F0 684 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 ZNF804AQ7Z570 1209 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 ZNF513Q8N8E2 541 aaPredicted RBP17.15■□□□□ 0.34
CHD1L-203ENST00000369259 RBM15Q96T37 977 aaKnown RBP eCLIP17.15■□□□□ 0.343e-6■■□□□ 11.8
CHD1L-203ENST00000369259 CIDEBQ9UHD4 219 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 ZNF510Q9Y2H8 683 aa17.15■□□□□ 0.34
CHD1L-203ENST00000369259 SHANK3Q9BYB0 1731 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 A0A0G2JND7 137 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 TRIM49P0CI25 452 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 TRIM49CP0CI26 452 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 RARBP10826 455 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 VAV1P15498 845 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 HIBADHP31937 336 aaKnown RBP17.14■□□□□ 0.33
CHD1L-203ENST00000369259 SFSWAPQ12872 951 aaKnown RBP17.14■□□□□ 0.33
CHD1L-203ENST00000369259 OVGP1Q12889 678 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 IZUMO3Q5VZ72 239 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 SPATA24Q86W54 205 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 CEP95Q96GE4 821 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 PCDHB18PQ96TA0 734 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 TRIM55Q9BYV6 548 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 PRDM11Q9NQV5 511 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 PFDN1O60925 122 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 RNASEH1O60930 286 aaKnown RBP17.14■□□□□ 0.33
CHD1L-203ENST00000369259 TBCAO75347 108 aaKnown RBP17.14■□□□□ 0.33
CHD1L-203ENST00000369259 CDK8P49336 464 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 NFIL3Q16649 462 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 TGFBRAP1Q8WUH2 860 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 LENG1Q96BZ8 264 aaPredicted RBP17.14■□□□□ 0.33
CHD1L-203ENST00000369259 OSBPL8Q9BZF1 889 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 FOXP3Q9BZS1 431 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 IKZF4Q9H2S9 585 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 BCAS3Q9H6U6 928 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 SAP30BPQ9UHR5 308 aaKnown RBP17.14■□□□□ 0.33
CHD1L-203ENST00000369259 NEU2Q9Y3R4 380 aa17.14■□□□□ 0.33
CHD1L-203ENST00000369259 A6NJR5 290 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 HNRNPRO43390 633 aaKnown RBP17.13■□□□□ 0.33
CHD1L-203ENST00000369259 CYP1A2P05177 515 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 CCDC166P0CW27 439 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 ARFIP2P53365 341 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 ZBTB16Q05516 673 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 CCDC89Q8N998 374 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.13■□□□□ 0.33
CHD1L-203ENST00000369259 SKA1Q96BD8 255 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 UBE2TQ9NPD8 197 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms