RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 TFR2Q9UP52 801 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 VMP1Q96GC9 406 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 RNPC3Q96LT9 517 aaKnown RBP19.1■□□□□ 0.65
SNX27-202ENST00000368841 KCNH4Q9UQ05 1017 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 GSG1L2A8MUP6 293 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 MZF1P28698 734 aaPredicted RBP19.1■□□□□ 0.65
SNX27-202ENST00000368841 USP10Q14694 798 aaKnown RBP19.1■□□□□ 0.65
SNX27-202ENST00000368841 TMEM132DQ14C87 1099 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 GOLGA7BQ2TAP0 167 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 PAN2Q504Q3 1202 aaKnown RBP19.1■□□□□ 0.65
SNX27-202ENST00000368841 LONP2Q86WA8 852 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 LATS2Q9NRM7 1088 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 DONSONQ9NYP3 566 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 AXIN2Q9Y2T1 843 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 NCF1BA6NI72 391 aaPredicted RBP19.09■□□□□ 0.65
SNX27-202ENST00000368841 NCF1CA8MVU1 366 aaPredicted RBP19.09■□□□□ 0.65
SNX27-202ENST00000368841 NCF1P14598 390 aaPredicted RBP19.09■□□□□ 0.65
SNX27-202ENST00000368841 ANGPT1Q15389 498 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 ZRANB3Q5FWF4 1079 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 FMR1NBQ8N0W7 255 aaPredicted RBP19.09■□□□□ 0.65
SNX27-202ENST00000368841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.09■□□□□ 0.652e-7■□□□□ 9.4
SNX27-202ENST00000368841 KBTBD13C9JR72 458 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 MAP3K6O95382 1288 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 MB21D2Q8IYB1 491 aaPredicted RBP19.09■□□□□ 0.65
SNX27-202ENST00000368841 ARHGAP18Q8N392 663 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 RAB42Q8N4Z0 105 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 FAM20AQ96MK3 541 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 ERVK-7P63135 1459 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 MYBL1P10243 752 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 BAATQ14032 418 aaPredicted RBP19.09■□□□□ 0.65
SNX27-202ENST00000368841 OR9Q1Q8NGQ5 310 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 COG1Q8WTW3 980 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 SPIRE2Q8WWL2 714 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 PTPRN2Q92932 1015 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 RERGLQ9H628 205 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 RAB6BQ9NRW1 208 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 FKBP9O95302 570 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 ALDH1A1P00352 501 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 PDXDC1Q6P996 788 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 FKBP9P1Q75LS8 142 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 ADAM21Q9UKJ8 722 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 CHMP2BQ9UQN3 213 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 ENDOD1O94919 500 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 SLC16A1P53985 500 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 DEPDC1Q5TB30 811 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 PARP9Q8IXQ6 854 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 NARFQ9UHQ1 456 aa19.09■□□□□ 0.65
SNX27-202ENST00000368841 CLEC4FQ8N1N0 589 aa19.08■□□□□ 0.65
SNX27-202ENST00000368841 TMEM106CQ9BVX2 250 aa19.08■□□□□ 0.65
SNX27-202ENST00000368841 METTL5Q9NRN9 209 aaKnown RBP19.08■□□□□ 0.65
SNX27-202ENST00000368841 ANKARQ7Z5J8 1434 aa19.08■□□□□ 0.65
SNX27-202ENST00000368841 GGPS1O95749 300 aa19.08■□□□□ 0.65
SNX27-202ENST00000368841 PGM1P36871 562 aa19.08■□□□□ 0.65
SNX27-202ENST00000368841 TRABDQ9H4I3 376 aa19.08■□□□□ 0.65
SNX27-202ENST00000368841 RAD51Q06609 339 aa19.08■□□□□ 0.65
SNX27-202ENST00000368841 CCDC142Q17RM4 750 aa19.08■□□□□ 0.65
SNX27-202ENST00000368841 SARM1Q6SZW1 724 aa19.08■□□□□ 0.65
SNX27-202ENST00000368841 PALMDQ9NP74 551 aa19.08■□□□□ 0.65
SNX27-202ENST00000368841 AIM2O14862 343 aa19.08■□□□□ 0.64
SNX27-202ENST00000368841 SPTLC1O15269 473 aa19.08■□□□□ 0.64
SNX27-202ENST00000368841 NDUFS3O75489 264 aa19.08■□□□□ 0.64
SNX27-202ENST00000368841 HSD17B4P51659 736 aa19.08■□□□□ 0.64
SNX27-202ENST00000368841 REEP2Q9BRK0 252 aa19.08■□□□□ 0.64
SNX27-202ENST00000368841 IRX2Q9BZI1 471 aaPredicted RBP19.08■□□□□ 0.64
SNX27-202ENST00000368841 CAV1Q03135 178 aa19.08■□□□□ 0.64
SNX27-202ENST00000368841 SH3BP1Q9Y3L3 701 aa19.08■□□□□ 0.64
SNX27-202ENST00000368841 PCDHA10Q9Y5I2 948 aa19.08■□□□□ 0.64
SNX27-202ENST00000368841 RTN2O75298 545 aa19.08■□□□□ 0.64
SNX27-202ENST00000368841 ORC4O43929 436 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 NME5P56597 212 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 ADCK1Q86TW2 530 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 CHP1Q99653 195 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 IL10P22301 178 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 RANBP1P43487 201 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 CAPZA2P47755 286 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 ZNF560Q96MR9 790 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 PLEKHG1Q9ULL1 1385 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 USE1Q9NZ43 259 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 ZNF263O14978 683 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 ARHGEF9O43307 516 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 NPTXRO95502 500 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 CHN1P15882 459 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 ACTR2P61160 394 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 R3HDM1Q15032 1099 aaKnown RBP19.07■□□□□ 0.64
SNX27-202ENST00000368841 TAF1CQ15572 869 aaPredicted RBP19.07■□□□□ 0.64
SNX27-202ENST00000368841 KAT2BQ92831 832 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 DCAF6Q58WW2 860 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 GLRA4Q5JXX5 417 aa19.07■□□□□ 0.64
SNX27-202ENST00000368841 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.07■□□□□ 0.64
SNX27-202ENST00000368841 FAM47DPA6NHR8 397 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 ARHGEF7Q14155 803 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 GOLPH3Q9H4A6 298 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 MYO3BQ8WXR4 1341 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 ZBTB39O15060 712 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 PDGFRAP16234 1089 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 BRINP3Q76B58 766 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 ZNF555Q8NEP9 628 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 ASAP3Q8TDY4 903 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 CYTH3O43739 400 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 HIC1Q14526 733 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms