RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 PNMA8AQ86V59 439 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-201ENST00000368287 ARHGEF25Q86VW2 580 aa4.58□□□□□ -1.68
ECHDC1-201ENST00000368287 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.58□□□□□ -1.68
ECHDC1-201ENST00000368287 TSPEARQ8WU66 669 aa4.58□□□□□ -1.68
ECHDC1-201ENST00000368287 TEKT5Q96M29 485 aa4.58□□□□□ -1.68
ECHDC1-201ENST00000368287 FDXACB1Q9BRP7 624 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-201ENST00000368287 SLC13A1Q9BZW2 595 aa4.58□□□□□ -1.68
ECHDC1-201ENST00000368287 CDH19Q9H159 772 aa4.58□□□□□ -1.68
ECHDC1-201ENST00000368287 ALG13Q9NP73 1137 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-201ENST00000368287 NOB1Q9ULX3 412 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-201ENST00000368287 CHST2Q9Y4C5 530 aa4.58□□□□□ -1.68
ECHDC1-201ENST00000368287 PHF2O75151 1096 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 AGXTP21549 392 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 C5AR1P21730 350 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 DDX6P26196 483 aaKnown RBP eCLIP4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 WNT3AP56704 352 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 RNASE9P60153 205 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 DUSP2Q05923 314 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 TP53BP2Q13625 1128 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 PPP2R5AQ15172 486 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 TPH2Q8IWU9 490 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 SLC44A3Q8N4M1 653 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 CPA6Q8N4T0 437 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 SNX33Q8WV41 574 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 ASB10Q8WXI3 467 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 WASF1Q92558 559 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 ADI1Q9BV57 179 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 GREM2Q9H772 168 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 ZNF277Q9NRM2 450 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 ING3Q9NXR8 418 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 TUBD1Q9UJT1 453 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 ZNF180Q9UJW8 692 aa4.57□□□□□ -1.68
ECHDC1-201ENST00000368287 LEFTY2O00292 366 aa4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 AKR1B10O60218 316 aa4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 SNUPNO95149 360 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 HLA-DOAP06340 250 aa4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 ZSCAN20P17040 1043 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 CTSSP25774 331 aa4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 MPLP40238 635 aa4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 SRSF4Q08170 494 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 ADRM1Q16186 407 aa4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 EFCAB2Q5VUJ9 269 aa4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 C14orf80Q86SX3 495 aa4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 PPM1NQ8N819 430 aa4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 PIK3C3Q8NEB9 887 aa4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 GPR156Q8NFN8 814 aa4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 OR5M3Q8NGP4 307 aa4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 JPH3Q8WXH2 748 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 RIN2Q8WYP3 895 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 LSM14BQ9BX40 385 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 SEMA4GQ9NTN9 838 aa4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 TCEAL9Q9UHQ7 104 aa4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 SAP30BPQ9UHR5 308 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 SERPINB13Q9UIV8 391 aa4.56□□□□□ -1.68
ECHDC1-201ENST00000368287 DIRC3C9JPN6 131 aa4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 GASTP01350 101 aa4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 PF4V1P10720 104 aa4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 ITGAMP11215 1152 aa4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 GSPT1P15170 499 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 RECQLP46063 649 aaPredicted RBP4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 FXR1P51114 621 aaKnown RBP eCLIP4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 KRT85P78386 507 aa4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 MALLQ13021 153 aa4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 TMEM240Q5SV17 173 aa4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 ABHD15Q6UXT9 468 aa4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 PDZD4Q76G19 769 aaPredicted RBP4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 WDR75Q8IWA0 830 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 CDC5LQ99459 802 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 TEX101Q9BY14 249 aa4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 ENKD1Q9H0I2 346 aa4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 DMRT3Q9NQL9 472 aa4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 KMT5AQ9NQR1 393 aa4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 RBM12Q9NTZ6 932 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 DNM3Q9UQ16 869 aa4.55□□□□□ -1.68
ECHDC1-201ENST00000368287 NDUFS2O75306 463 aa4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 SPATA31D3P0C874 917 aa4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 EGR2P11161 476 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 ADSLP30566 484 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 SLC16A1P53985 500 aa4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 PER3P56645 1201 aa4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 NHLH2Q02577 135 aa4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 NOMO1Q15155 1222 aa4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 SPATA31D4Q6ZUB0 917 aa4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 DOK3Q7L591 496 aa4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 CHPFQ8IZ52 775 aa4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 MSL3Q8N5Y2 521 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 ZNF480Q8WV37 535 aa4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 TCF7L1Q9HCS4 588 aa4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 RNF181Q9P0P0 153 aa4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 ZNF70Q9UC06 446 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 CLCA2Q9UQC9 943 aa4.54□□□□□ -1.68
ECHDC1-201ENST00000368287 LRRC3CA6NJW4 275 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 FAM171A2A8MVW0 826 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 PRR5-ARHGAP8B1AHC4 643 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 TMEM127O75204 238 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 SPDEFO95238 335 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 ECHS1P30084 290 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 CRHR1P34998 444 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 CASRP41180 1078 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms