RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 PITPNM3Q9BZ71 974 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 ATF5Q9Y2D1 282 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 MICAL3Q7RTP6 2002 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 FRMPD4Q14CM0 1322 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 EXOC1LA0A1B0GW35 172 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 POC1B-GALNT4F8VUJ3 575 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 CDH16O75309 829 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 KRT8P05787 483 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 TRIM49P0CI25 452 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 TRIM49CP0CI26 452 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 BASP1P80723 227 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 C4orf22Q6V702 233 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 HAS1Q92839 578 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 CENPTQ96BT3 561 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 ALKBH8Q96BT7 664 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 ZSWIM1Q9BR11 485 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 KCTD10Q9H3F6 313 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 RNF146Q9NTX7 359 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 AGO2Q9UKV8 859 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 TLR3O15455 904 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 CYP26A1O43174 497 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 GAS2O43903 313 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 DIAPH2O60879 1101 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 GSTA1P08263 222 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 IL1RL1Q01638 556 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 SNRNP35Q16560 246 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 NUGGCQ68CJ6 796 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 RGS9BPQ6ZS82 235 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 SESTD1Q86VW0 696 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 SLC13A5Q86YT5 568 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 MRPL4Q9BYD3 311 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 RPF1Q9H9Y2 349 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 ZNF302Q9NR11 478 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 WDR70Q9NW82 654 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 ASNSD1Q9NWL6 643 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 AKAP3O75969 853 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 IFNB1P01574 187 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 MRPS25P82663 173 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 ZNF211Q13398 564 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 YTHDF3Q7Z739 585 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 FAM83AQ86UY5 434 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 CCDC125Q86Z20 511 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 C12orf56Q8IXR9 622 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 HACE1Q8IYU2 909 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 SERPINI1Q99574 410 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 ACAD9Q9H845 621 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 CD248Q9HCU0 757 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 WHRNQ9P202 907 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 ZNF229Q9UJW7 825 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 ORC6Q9Y5N6 252 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 POLRMTO00411 1230 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 WNT7AO00755 349 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 OSBPP22059 807 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 RAP1GDS1P52306 607 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 ARL4CP56559 192 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 TMED2Q15363 201 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 SCFD2Q8WU76 684 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 SEC16BQ96JE7 1060 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 MOV10L1Q9BXT6 1211 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 CYP26B1Q9NR63 512 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 GABBR1Q9UBS5 961 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 MKL2Q9ULH7 1088 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 ZNRF3Q9ULT6 936 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 NUP188Q5SRE5 1749 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 C21orf2O43822 256 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 EXTL3O43909 919 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 SLITRK3O94933 977 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 VIL1P09327 827 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 KRT17Q04695 432 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 KLC1Q07866 573 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 PIGHQ14442 188 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 STILQ15468 1287 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 MAPK6Q16659 721 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 ATG16L1Q676U5 607 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 JADE1Q6IE81 842 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 EPM2AIP1Q7L775 607 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 PDIK1LQ8N165 341 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 ANKFY1Q9P2R3 1169 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 IGSF9BQ9UPX0 1349 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 MYH3P11055 1940 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 GYG2O15488 501 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 RAD17O75943 681 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 RXRBP28702 533 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 TRPC1P48995 793 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 YARSP54577 528 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 RPS6KA2Q15349 733 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 ZC2HC1CQ53FD0 456 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 SWSAP1Q6NVH7 229 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 MIGA2Q7L4E1 593 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 NT5DC3Q86UY8 548 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 PYROXD1Q8WU10 500 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 MED15Q96RN5 788 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 GCOM2Q9BZD3 368 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 RANBP17Q9H2T7 1088 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 TTC7AQ9ULT0 858 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 SLIT2O94813 1529 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 WBP4O75554 376 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-204ENST00000366767 COMTP21964 271 aa5.66□□□□□ -1.5
CDC42BPA-204ENST00000366767 KCNA3P22001 575 aa5.66□□□□□ -1.5
CDC42BPA-204ENST00000366767 CAP2P40123 477 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms