RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 FAM171A1Q5VUB5 890 aa18.4■□□□□ 0.54
CKLF-204ENST00000362093 KIF12Q96FN5 646 aa18.4■□□□□ 0.54
CKLF-204ENST00000362093 FNIP2Q9P278 1114 aa18.4■□□□□ 0.54
CKLF-204ENST00000362093 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.4■□□□□ 0.54
CKLF-204ENST00000362093 TCF20Q9UGU0 1960 aaKnown RBP18.4■□□□□ 0.54
CKLF-204ENST00000362093 ZNF202O95125 648 aa18.39■□□□□ 0.53
CKLF-204ENST00000362093 EPCAMP16422 314 aa18.39■□□□□ 0.53
CKLF-204ENST00000362093 HOXB8P17481 243 aaPredicted RBP18.39■□□□□ 0.53
CKLF-204ENST00000362093 CYP3A5P20815 502 aa18.39■□□□□ 0.53
CKLF-204ENST00000362093 CLCN4P51793 760 aa18.39■□□□□ 0.53
CKLF-204ENST00000362093 SMAD2Q15796 467 aaKnown RBP18.39■□□□□ 0.53
CKLF-204ENST00000362093 TPRNQ4KMQ1 711 aa18.39■□□□□ 0.53
CKLF-204ENST00000362093 ZSWIM2Q8NEG5 633 aa18.39■□□□□ 0.53
CKLF-204ENST00000362093 SCFD1Q8WVM8 642 aa18.39■□□□□ 0.53
CKLF-204ENST00000362093 RIN2Q8WYP3 895 aaPredicted RBP18.39■□□□□ 0.53
CKLF-204ENST00000362093 NECAB3Q96P71 396 aaPredicted RBP18.39■□□□□ 0.53
CKLF-204ENST00000362093 UHRF1Q96T88 793 aaPredicted RBP18.39■□□□□ 0.53
CKLF-204ENST00000362093 TTPALQ9BTX7 342 aa18.39■□□□□ 0.53
CKLF-204ENST00000362093 ASB7Q9H672 318 aa18.39■□□□□ 0.53
CKLF-204ENST00000362093 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.39■□□□□ 0.53
CKLF-204ENST00000362093 TUBGCP4Q9UGJ1 667 aa18.39■□□□□ 0.53
CKLF-204ENST00000362093 UBQLN1Q9UMX0 589 aaKnown RBP18.39■□□□□ 0.53
CKLF-204ENST00000362093 FAM50BQ9Y247 325 aa18.39■□□□□ 0.53
CKLF-204ENST00000362093 LDHAP00338 332 aaKnown RBP18.38■□□□□ 0.53
CKLF-204ENST00000362093 C1RP00736 705 aa18.38■□□□□ 0.53
CKLF-204ENST00000362093 FGFR3P22607 806 aa18.38■□□□□ 0.53
CKLF-204ENST00000362093 BRCC3P46736 316 aa18.38■□□□□ 0.53
CKLF-204ENST00000362093 KMT5BQ4FZB7 885 aa18.38■□□□□ 0.53
CKLF-204ENST00000362093 JADE1Q6IE81 842 aa18.38■□□□□ 0.53
CKLF-204ENST00000362093 PRSS55Q6UWB4 352 aaPredicted RBP18.38■□□□□ 0.53
CKLF-204ENST00000362093 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.38■□□□□ 0.53
CKLF-204ENST00000362093 KRBA2Q6ZNG9 492 aa18.38■□□□□ 0.53
CKLF-204ENST00000362093 CEP57Q86XR8 500 aa18.38■□□□□ 0.53
CKLF-204ENST00000362093 TMEM130Q8N3G9 435 aa18.38■□□□□ 0.53
CKLF-204ENST00000362093 LNX1Q8TBB1 728 aaPredicted RBP18.38■□□□□ 0.53
CKLF-204ENST00000362093 PIK3R5Q8WYR1 880 aa18.38■□□□□ 0.53
CKLF-204ENST00000362093 FAM212AQ96EL1 285 aa18.38■□□□□ 0.53
CKLF-204ENST00000362093 CBWD1Q9BRT8 395 aa18.38■□□□□ 0.53
CKLF-204ENST00000362093 SLC39A2Q9NP94 309 aa18.38■□□□□ 0.53
CKLF-204ENST00000362093 DERAQ9Y315 318 aa18.38■□□□□ 0.53
CKLF-204ENST00000362093 TGFB1I1O43294 461 aa18.37■□□□□ 0.53
CKLF-204ENST00000362093 XPOTO43592 962 aaKnown RBP18.37■□□□□ 0.53
CKLF-204ENST00000362093 TRAPPC3O43617 180 aa18.37■□□□□ 0.53
CKLF-204ENST00000362093 ADH1AP07327 375 aa18.37■□□□□ 0.53
CKLF-204ENST00000362093 PSMD2Q13200 908 aa18.37■□□□□ 0.53
CKLF-204ENST00000362093 SPATA1Q5VX52 437 aa18.37■□□□□ 0.53
CKLF-204ENST00000362093 ARMCX5Q6P1M9 558 aa18.37■□□□□ 0.53
CKLF-204ENST00000362093 SUSD6Q92537 303 aa18.37■□□□□ 0.53
CKLF-204ENST00000362093 FAM213AQ9BRX8 229 aa18.37■□□□□ 0.53
CKLF-204ENST00000362093 PCIF1Q9H4Z3 704 aa18.37■□□□□ 0.53
CKLF-204ENST00000362093 UBE4BO95155 1302 aa18.37■□□□□ 0.53
CKLF-204ENST00000362093 VCANP13611 3396 aa18.36■□□□□ 0.53
CKLF-204ENST00000362093 I3L4J1 428 aa18.36■□□□□ 0.53
CKLF-204ENST00000362093 KIAA0391O15091 583 aaKnown RBP18.36■□□□□ 0.53
CKLF-204ENST00000362093 EXTL3O43909 919 aa18.36■□□□□ 0.53
CKLF-204ENST00000362093 NFICP08651 508 aa18.36■□□□□ 0.53
CKLF-204ENST00000362093 SNRPFP62306 86 aaKnown RBP18.36■□□□□ 0.53
CKLF-204ENST00000362093 CREMQ03060 361 aa18.36■□□□□ 0.53
CKLF-204ENST00000362093 STK4Q13043 487 aa18.36■□□□□ 0.53
CKLF-204ENST00000362093 BMT2Q1RMZ1 405 aa18.36■□□□□ 0.53
CKLF-204ENST00000362093 FMR1NBQ8N0W7 255 aaPredicted RBP18.36■□□□□ 0.53
CKLF-204ENST00000362093 SAAL1Q96ER3 474 aa18.36■□□□□ 0.53
CKLF-204ENST00000362093 FBXL18Q96ME1 805 aa18.36■□□□□ 0.53
CKLF-204ENST00000362093 DZANK1Q9NVP4 752 aa18.36■□□□□ 0.53
CKLF-204ENST00000362093 C2CD2Q9Y426 696 aa18.36■□□□□ 0.53
CKLF-204ENST00000362093 USP15Q9Y4E8 981 aaPredicted RBP18.36■□□□□ 0.53
CKLF-204ENST00000362093 PDCD11Q14690 1871 aaKnown RBP18.35■□□□□ 0.53
CKLF-204ENST00000362093 GOLGA8IPA6NC78 632 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 GOLGA6L4A6NEF3 574 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 GOLGA8JA6NMD2 632 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 IL18RAPO95256 599 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 PRR29P0C7W0 189 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 RPL17P18621 184 aaKnown RBP18.35■□□□□ 0.53
CKLF-204ENST00000362093 TKTP29401 623 aaKnown RBP18.35■□□□□ 0.53
CKLF-204ENST00000362093 ANP32AP39687 249 aaKnown RBP18.35■□□□□ 0.53
CKLF-204ENST00000362093 GUCY2FP51841 1108 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 WNT7BP56706 349 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 DPYDQ12882 1025 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 SNW1Q13573 536 aaKnown RBP18.35■□□□□ 0.53
CKLF-204ENST00000362093 TMEM132DQ14C87 1099 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 PDXDC1Q6P996 788 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 LILRA6Q6PI73 481 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 BRSK2Q8IWQ3 736 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 NELFCDQ8IXH7 590 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 ENGASEQ8NFI3 743 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 BEST2Q8NFU1 509 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 SUSD3Q96L08 255 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 CLSTN3Q9BQT9 956 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 ADAM7Q9H2U9 754 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 EXOC1Q9NV70 894 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 PRKAG3Q9UGI9 489 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 NUB1Q9Y5A7 615 aa18.35■□□□□ 0.53
CKLF-204ENST00000362093 ANO9A1A5B4 782 aa18.34■□□□□ 0.53
CKLF-204ENST00000362093 SYN3O14994 580 aa18.34■□□□□ 0.53
CKLF-204ENST00000362093 TGM5O43548 720 aa18.34■□□□□ 0.53
CKLF-204ENST00000362093 GLUD1P00367 558 aa18.34■□□□□ 0.53
CKLF-204ENST00000362093 RPN1P04843 607 aaKnown RBP18.34■□□□□ 0.53
CKLF-204ENST00000362093 AARSP49588 968 aaKnown RBP eCLIP18.34■□□□□ 0.53
CKLF-204ENST00000362093 ITIH3Q06033 890 aa18.34■□□□□ 0.53
CKLF-204ENST00000362093 MRPL58Q14197 206 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms