RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 NR2E1Q9Y466 385 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 FOXO6A8MYZ6 492 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 DNM1LO00429 736 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 TTC4O95801 387 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 LRRC23Q53EV4 343 aaPredicted RBP14.69□□□□□ -0.06
COL6A1-201ENST00000361866 ERMARDQ5T6L9 678 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 CD302Q8IX05 232 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 ATXN7L3BQ96GX2 97 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 APOL6Q9BWW8 343 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 OSBPL7Q9BZF2 842 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 PNMA3Q9UL41 463 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 INPP5FQ9Y2H2 1132 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 TMEM150BA6NC51 233 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 H3BRJ5 948 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 NOL3O60936 208 aaKnown RBP14.69□□□□□ -0.06
COL6A1-201ENST00000361866 PPFIA2O75334 1257 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 CBX6O95503 412 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 CYP11B1P15538 503 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 ECE1P42892 770 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 FNTAP49354 379 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 SLC12A2P55011 1212 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 MAP3K21Q5TCX8 1036 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 GPD1LQ8N335 351 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 SCFD2Q8WU76 684 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 ALG3Q92685 438 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 FGD4Q96M96 766 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 IP6K2Q9UHH9 426 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 AGO2Q9UKV8 859 aaKnown RBP14.69□□□□□ -0.06
COL6A1-201ENST00000361866 USP20Q9Y2K6 914 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 CASQ2O14958 399 aaPredicted RBP14.69□□□□□ -0.06
COL6A1-201ENST00000361866 EIF3DO15371 548 aaKnown RBP eCLIP14.69□□□□□ -0.06
COL6A1-201ENST00000361866 P4HA1P13674 534 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 DRD4P21917 467 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 KCNA3P22001 575 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 PSMC5P62195 406 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 RCN1Q15293 331 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 MMEL1Q495T6 779 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 NLRP9Q7RTR0 991 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 YTHDF3Q7Z739 585 aaKnown RBP14.69□□□□□ -0.06
COL6A1-201ENST00000361866 FAM160B2Q86V87 743 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 ACAP3Q96P50 834 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 VPS11Q9H270 941 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 ATP6V0A4Q9HBG4 840 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 CHST7Q9NS84 486 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 NRBP2Q9NSY0 501 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 MYH10P35580 1976 aa14.69□□□□□ -0.06
COL6A1-201ENST00000361866 UBE4BO95155 1302 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 A0A0A6YYK5 440 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-201ENST00000361866 E2F8A0AVK6 867 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 ZCCHC18P0CG32 403 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 SWT1Q5T5J6 900 aaKnown RBP14.68□□□□□ -0.06
COL6A1-201ENST00000361866 CCDC125Q86Z20 511 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 ARHGEF19Q8IW93 802 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 TMEM143Q96AN5 459 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 NAF1Q96HR8 494 aaKnown RBP14.68□□□□□ -0.06
COL6A1-201ENST00000361866 PPP1R36Q96LQ0 422 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 HEY2Q9UBP5 337 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 POLLQ9UGP5 575 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 SMG5Q9UPR3 1016 aaKnown RBP14.68□□□□□ -0.06
COL6A1-201ENST00000361866 CCDC22O60826 627 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 NOL4O94818 638 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 SERPINB4P48594 390 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 ATXN3P54252 364 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-201ENST00000361866 PREPLQ4J6C6 727 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-201ENST00000361866 MTDHQ86UE4 582 aaKnown RBP14.68□□□□□ -0.06
COL6A1-201ENST00000361866 ST13P4Q8IZP2 240 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-201ENST00000361866 MCUQ8NE86 351 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 LNX1Q8TBB1 728 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-201ENST00000361866 ANKRD36BP1Q96IX9 119 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 FAF1Q9UNN5 650 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-201ENST00000361866 APOBEC2Q9Y235 224 aaKnown RBP14.68□□□□□ -0.06
COL6A1-201ENST00000361866 C15orf41Q9Y2V0 281 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 APRTP07741 180 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 SATB1Q01826 763 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 DBN1Q16643 649 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 ACCSLQ4AC99 568 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 DAB2IPQ5VWQ8 1189 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 PODNQ7Z5L7 613 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 PRUNE1Q86TP1 453 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 RBM46Q8TBY0 533 aaKnown RBP14.68□□□□□ -0.06
COL6A1-201ENST00000361866 ACER1Q8TDN7 264 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 PURBQ96QR8 312 aaKnown RBP14.68□□□□□ -0.06
COL6A1-201ENST00000361866 TBC1D22BQ9NU19 505 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 PARVAQ9NVD7 372 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 NYAP2Q9P242 653 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 PSMC3IPQ9P2W1 217 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-201ENST00000361866 LOC100653049A0A140TA62 436 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 CAPN9O14815 690 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 KIAA0391O15091 583 aaKnown RBP14.68□□□□□ -0.06
COL6A1-201ENST00000361866 ASAP2O43150 1006 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 SNX3O60493 162 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 KRT34O76011 436 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 PSAPP07602 524 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 SETSIPP0DME0 302 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 CDH6P55285 790 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 KCNT1Q5JUK3 1230 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 NCAPG2Q86XI2 1143 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 MCPH1Q8NEM0 835 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 CEP70Q8NHQ1 597 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 AGBL1Q96MI9 1066 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms