RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 CCDC169A6NNP5 214 aa23.16■■□□□ 1.3
CD47-202ENST00000361309 SPTLC1O15269 473 aa23.16■■□□□ 1.3
CD47-202ENST00000361309 ABLIM3O94929 683 aa23.16■■□□□ 1.3
CD47-202ENST00000361309 ARPP19P56211 112 aa23.16■■□□□ 1.3
CD47-202ENST00000361309 XKR4Q5GH76 650 aa23.16■■□□□ 1.3
CD47-202ENST00000361309 CLDN23Q96B33 292 aa23.16■■□□□ 1.3
CD47-202ENST00000361309 BORCS6Q96GS4 357 aa23.16■■□□□ 1.3
CD47-202ENST00000361309 NELL2Q99435 816 aa23.16■■□□□ 1.3
CD47-202ENST00000361309 FOXP1Q9H334 677 aaPredicted RBP23.16■■□□□ 1.3
CD47-202ENST00000361309 PCDHGA2Q9Y5H1 932 aa23.16■■□□□ 1.3
CD47-202ENST00000361309 PHLPP2Q6ZVD8 1323 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 PODXLO00592 558 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 PRRG1O14668 218 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 NCAM2O15394 837 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 FXR2P51116 673 aaKnown RBP eCLIP23.15■■□□□ 1.3
CD47-202ENST00000361309 PEX3P56589 373 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 ZNF568Q3ZCX4 644 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 ZNF852Q6ZMS4 543 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 ATRIPQ8WXE1 791 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 ELSPBP1Q96BH3 223 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 TCEAL4Q96EI5 215 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 ZMAT2Q96NC0 199 aaKnown RBP23.15■■□□□ 1.3
CD47-202ENST00000361309 CORO1BQ9BR76 489 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 PTPRHQ9HD43 1115 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 DDX19AQ9NUU7 478 aaKnown RBP23.15■■□□□ 1.3
CD47-202ENST00000361309 SLC38A7Q9NVC3 462 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 DLL3Q9NYJ7 618 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 NCDNQ9UBB6 729 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 LRWD1Q9UFC0 647 aa23.15■■□□□ 1.3
CD47-202ENST00000361309 COL4A2P08572 1712 aa23.14■■□□□ 1.3
CD47-202ENST00000361309 TBC1D4O60343 1298 aa23.14■■□□□ 1.29
CD47-202ENST00000361309 ATF2P15336 505 aa23.14■■□□□ 1.29
CD47-202ENST00000361309 NPTX2P47972 431 aa23.14■■□□□ 1.29
CD47-202ENST00000361309 PRSS36Q5K4E3 855 aa23.14■■□□□ 1.29
CD47-202ENST00000361309 C4orf32Q8N8J7 132 aa23.14■■□□□ 1.29
CD47-202ENST00000361309 MRPL4Q9BYD3 311 aaKnown RBP23.14■■□□□ 1.29
CD47-202ENST00000361309 CYP4F11Q9HBI6 524 aa23.14■■□□□ 1.29
CD47-202ENST00000361309 ZSCAN32Q9NX65 697 aa23.14■■□□□ 1.29
CD47-202ENST00000361309 SPTBN2O15020 2390 aa23.13■■□□□ 1.29
CD47-202ENST00000361309 SHISA7A6NL88 538 aa23.13■■□□□ 1.29
CD47-202ENST00000361309 SEC24AO95486 1093 aa23.13■■□□□ 1.29
CD47-202ENST00000361309 FCARP24071 287 aa23.13■■□□□ 1.29
CD47-202ENST00000361309 RPS9P46781 194 aaKnown RBP23.13■■□□□ 1.29
CD47-202ENST00000361309 FZD5Q13467 585 aa23.13■■□□□ 1.29
CD47-202ENST00000361309 GRM2Q14416 872 aa23.13■■□□□ 1.29
CD47-202ENST00000361309 NBR1Q14596 966 aa23.13■■□□□ 1.29
CD47-202ENST00000361309 RSPO4Q2I0M5 234 aaPredicted RBP23.13■■□□□ 1.29
CD47-202ENST00000361309 TSSK4Q6SA08 328 aa23.13■■□□□ 1.29
CD47-202ENST00000361309 TAS1R3Q7RTX0 852 aa23.13■■□□□ 1.29
CD47-202ENST00000361309 CCDC83Q8IWF9 413 aa23.13■■□□□ 1.29
CD47-202ENST00000361309 TCEAL8Q8IYN2 117 aa23.13■■□□□ 1.29
CD47-202ENST00000361309 ZBTB44Q8NCP5 570 aa23.13■■□□□ 1.29
CD47-202ENST00000361309 TARS2Q9BW92 718 aaKnown RBP23.13■■□□□ 1.29
CD47-202ENST00000361309 TMEM134Q9H6X4 195 aa23.13■■□□□ 1.29
CD47-202ENST00000361309 MRPS17Q9Y2R5 130 aaKnown RBP23.13■■□□□ 1.29
CD47-202ENST00000361309 H7C4K7 107 aa23.12■■□□□ 1.29
CD47-202ENST00000361309 SYN3O14994 580 aa23.12■■□□□ 1.29
CD47-202ENST00000361309 HIP1RO75146 1068 aa23.12■■□□□ 1.29
CD47-202ENST00000361309 ADCY1Q08828 1119 aa23.12■■□□□ 1.29
CD47-202ENST00000361309 MRPL58Q14197 206 aaKnown RBP23.12■■□□□ 1.29
CD47-202ENST00000361309 FAM78AQ5JUQ0 283 aa23.12■■□□□ 1.29
CD47-202ENST00000361309 DAW1Q8N136 415 aa23.12■■□□□ 1.29
CD47-202ENST00000361309 SNX29Q8TEQ0 813 aa23.12■■□□□ 1.29
CD47-202ENST00000361309 NELL1Q92832 810 aa23.12■■□□□ 1.29
CD47-202ENST00000361309 DNASE1L2Q92874 299 aa23.12■■□□□ 1.29
CD47-202ENST00000361309 C18orf25Q96B23 403 aaPredicted RBP23.12■■□□□ 1.29
CD47-202ENST00000361309 ACAP3Q96P50 834 aa23.12■■□□□ 1.29
CD47-202ENST00000361309 ZFP14Q9HCL3 533 aa23.12■■□□□ 1.29
CD47-202ENST00000361309 ARHGAP28Q9P2N2 729 aa23.12■■□□□ 1.29
CD47-202ENST00000361309 FBXL5Q9UKA1 691 aa23.12■■□□□ 1.29
CD47-202ENST00000361309 NUB1Q9Y5A7 615 aa23.12■■□□□ 1.29
CD47-202ENST00000361309 INSL5Q9Y5Q6 135 aa23.12■■□□□ 1.29
CD47-202ENST00000361309 E9PMD0 336 aa23.11■■□□□ 1.29
CD47-202ENST00000361309 NRG2O14511 850 aaPredicted RBP23.11■■□□□ 1.29
CD47-202ENST00000361309 ZNF197O14709 1029 aa23.11■■□□□ 1.29
CD47-202ENST00000361309 MCF2P10911 925 aa23.11■■□□□ 1.29
CD47-202ENST00000361309 KCNE1P15382 129 aa23.11■■□□□ 1.29
CD47-202ENST00000361309 CCR2P41597 374 aa23.11■■□□□ 1.29
CD47-202ENST00000361309 DMP1Q13316 513 aaPredicted RBP23.11■■□□□ 1.29
CD47-202ENST00000361309 GNL2Q13823 731 aaKnown RBP23.11■■□□□ 1.29
CD47-202ENST00000361309 PDIA5Q14554 519 aa23.11■■□□□ 1.29
CD47-202ENST00000361309 FBXO18Q8NFZ0 1043 aa23.11■■□□□ 1.29
CD47-202ENST00000361309 TCHPQ9BT92 498 aa23.11■■□□□ 1.29
CD47-202ENST00000361309 BRD9Q9H8M2 597 aa23.11■■□□□ 1.29
CD47-202ENST00000361309 KMT5AQ9NQR1 393 aa23.11■■□□□ 1.29
CD47-202ENST00000361309 PRMT8Q9NR22 394 aaPredicted RBP23.11■■□□□ 1.29
CD47-202ENST00000361309 CNTN3Q9P232 1028 aa23.11■■□□□ 1.29
CD47-202ENST00000361309 NDRG2Q9UN36 371 aaKnown RBP23.11■■□□□ 1.29
CD47-202ENST00000361309 ABLIM1O14639 778 aa23.1■■□□□ 1.29
CD47-202ENST00000361309 LILRB5O75023 590 aa23.1■■□□□ 1.29
CD47-202ENST00000361309 MICAL2O94851 1124 aa23.1■■□□□ 1.29
CD47-202ENST00000361309 HARSP12081 509 aaKnown RBP23.1■■□□□ 1.29
CD47-202ENST00000361309 PROZP22891 400 aa23.1■■□□□ 1.29
CD47-202ENST00000361309 RPL9P32969 192 aaKnown RBP23.1■■□□□ 1.29
CD47-202ENST00000361309 TRAPPC10P48553 1259 aa23.1■■□□□ 1.29
CD47-202ENST00000361309 MTAPQ13126 283 aa23.1■■□□□ 1.29
CD47-202ENST00000361309 CTXN3Q4LDR2 81 aa23.1■■□□□ 1.29
CD47-202ENST00000361309 TPGS2Q68CL5 300 aa23.1■■□□□ 1.29
CD47-202ENST00000361309 MPZL3Q6UWV2 235 aa23.1■■□□□ 1.29
CD47-202ENST00000361309 PDZD4Q76G19 769 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms