RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 RIMS1Q86UR5 1692 aaKnown RBP14.71□□□□□ -0.06
SMC5-201ENST00000361138 ZCCHC18P0CG32 403 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 KRT4P19013 534 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 ALDH5A1P51649 535 aaPredicted RBP14.7□□□□□ -0.06
SMC5-201ENST00000361138 CDKL3Q8IVW4 592 aaPredicted RBP14.7□□□□□ -0.06
SMC5-201ENST00000361138 FBXO25Q8TCJ0 367 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 TROAPQ12815 778 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 CENPTQ96BT3 561 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 HDAC4P56524 1084 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 MFN1Q8IWA4 741 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 CMTM5Q96DZ9 223 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 RPS6KC1Q96S38 1066 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 SNX5Q9Y5X3 404 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 INO80B-WBP1J3KQ70 363 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 CACNA2D1P54289 1103 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 SLC12A1Q13621 1099 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 CENPPQ6IPU0 288 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 LRRC8EQ6NSJ5 796 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 RNF169Q8NCN4 708 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 CDHR1Q96JP9 859 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 KLF6Q99612 283 aaPredicted RBP14.7□□□□□ -0.06
SMC5-201ENST00000361138 INO80BQ9C086 356 aaPredicted RBP14.7□□□□□ -0.06
SMC5-201ENST00000361138 CCDC134Q9H6E4 229 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 PKN1Q16512 942 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 ZNF699Q32M78 642 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 GIPC2Q8TF65 315 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 CELF1Q92879 486 aaKnown RBP14.7□□□□□ -0.06
SMC5-201ENST00000361138 CEP19Q96LK0 163 aa14.7□□□□□ -0.06
SMC5-201ENST00000361138 RPF1Q9H9Y2 349 aaKnown RBP14.7□□□□□ -0.06
SMC5-201ENST00000361138 SUPT3HO75486 399 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 BBOX1O75936 387 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 CALB2P22676 271 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 ZNF662Q6ZS27 426 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 MKNK1Q9BUB5 465 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 MAPRE2Q15555 327 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 MTDHQ86UE4 582 aaKnown RBP14.69□□□□□ -0.06
SMC5-201ENST00000361138 DHX38Q92620 1227 aaKnown RBP14.69□□□□□ -0.06
SMC5-201ENST00000361138 TATDN2Q93075 761 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 PBXIP1Q96AQ6 731 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 PCMTD2Q9NV79 361 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 CHORDC1Q9UHD1 332 aaPredicted RBP14.69□□□□□ -0.06
SMC5-201ENST00000361138 ADCY3O60266 1144 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 EIF2AK2P19525 551 aaKnown RBP14.69□□□□□ -0.06
SMC5-201ENST00000361138 BMP6P22004 513 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 TYK2P29597 1187 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 QARSP47897 775 aaKnown RBP14.69□□□□□ -0.06
SMC5-201ENST00000361138 HAUS6Q7Z4H7 955 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 EXOC8Q8IYI6 725 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 MREGQ8N565 214 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 SNX25Q9H3E2 840 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 CHCHD3Q9NX63 227 aaKnown RBP14.69□□□□□ -0.06
SMC5-201ENST00000361138 NDUFA13Q9P0J0 144 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 PIK3R2O00459 728 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 TBX3O15119 743 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 ZC2HC1CQ53FD0 456 aaPredicted RBP14.69□□□□□ -0.06
SMC5-201ENST00000361138 AGR3Q8TD06 166 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 PRCCQ92733 491 aaPredicted RBP14.69□□□□□ -0.06
SMC5-201ENST00000361138 CNBD2Q96M20 576 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 LRRC10BA6NIK2 292 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 F5H423 210 aaPredicted RBP14.69□□□□□ -0.06
SMC5-201ENST00000361138 MAN1A2O60476 641 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 ITGA4P13612 1032 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 IGBP1P78318 339 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 AMPD2Q01433 879 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 CHI3L2Q15782 390 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 ZNF667Q5HYK9 610 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 CCDC117Q8IWD4 279 aaPredicted RBP14.69□□□□□ -0.06
SMC5-201ENST00000361138 SCUBE1Q8IWY4 988 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 EIF1ADQ8N9N8 165 aaKnown RBP14.69□□□□□ -0.06
SMC5-201ENST00000361138 MCPH1Q8NEM0 835 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 ZC3H15Q8WU90 426 aaKnown RBP14.69□□□□□ -0.06
SMC5-201ENST00000361138 E2F7Q96AV8 911 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 TBC1D22BQ9NU19 505 aa14.69□□□□□ -0.06
SMC5-201ENST00000361138 ATP4AP20648 1035 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 EPHA7Q15375 998 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 SYCP2LQ5T4T6 812 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 CRELD2Q6UXH1 353 aaPredicted RBP14.68□□□□□ -0.06
SMC5-201ENST00000361138 SH3RF1Q7Z6J0 888 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 SYCE1LA8MT33 242 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 APOL1O14791 398 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 SLC37A4O43826 429 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 SEC24DO94855 1032 aaPredicted RBP14.68□□□□□ -0.06
SMC5-201ENST00000361138 WEE2P0C1S8 567 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 RALAP11233 206 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 HEATR6Q6AI08 1181 aaKnown RBP14.68□□□□□ -0.06
SMC5-201ENST00000361138 TMEM139Q8IV31 216 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 GALNT4Q8N4A0 578 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 ARHGEF26Q96DR7 871 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 SEMA4AQ9H3S1 761 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 CHMP2BQ9UQN3 213 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 MYO3BQ8WXR4 1341 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 ZFXP17010 805 aaPredicted RBP14.68□□□□□ -0.06
SMC5-201ENST00000361138 PAMP19021 973 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 ACBD5Q5T8D3 534 aaPredicted RBP14.68□□□□□ -0.06
SMC5-201ENST00000361138 ARHGAP22Q7Z5H3 698 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 CCT7Q99832 543 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 OSGEPQ9NPF4 335 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 SPAG6O75602 509 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 SERPINB9P50453 376 aa14.68□□□□□ -0.06
SMC5-201ENST00000361138 TAF12Q16514 161 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms