RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 A0A0U1RQJ8 604 aa22.57■■□□□ 1.2
MAP1LC3A-201ENST00000360668 A0A1W2PQ45 241 aaPredicted RBP22.57■■□□□ 1.2
MAP1LC3A-201ENST00000360668 A0A1W2PQY0 241 aa22.57■■□□□ 1.2
MAP1LC3A-201ENST00000360668 CITO14578 2027 aa22.57■■□□□ 1.2
MAP1LC3A-201ENST00000360668 CHRNA1P02708 482 aa22.57■■□□□ 1.2
MAP1LC3A-201ENST00000360668 TRPC3Q13507 836 aa22.57■■□□□ 1.2
MAP1LC3A-201ENST00000360668 RALGAPA2Q2PPJ7 1873 aa22.57■■□□□ 1.2
MAP1LC3A-201ENST00000360668 JADE1Q6IE81 842 aa22.57■■□□□ 1.2
MAP1LC3A-201ENST00000360668 ATRIPQ8WXE1 791 aa22.57■■□□□ 1.2
MAP1LC3A-201ENST00000360668 TSGA10Q9BZW7 698 aa22.57■■□□□ 1.2
MAP1LC3A-201ENST00000360668 TRIM6Q9C030 488 aaPredicted RBP22.57■■□□□ 1.2
MAP1LC3A-201ENST00000360668 APOBEC3GQ9HC16 384 aaKnown RBP22.57■■□□□ 1.2
MAP1LC3A-201ENST00000360668 ADAMTS1Q9UHI8 967 aa22.57■■□□□ 1.2
MAP1LC3A-201ENST00000360668 C2CD2Q9Y426 696 aa22.57■■□□□ 1.2
MAP1LC3A-201ENST00000360668 ASS1P00966 412 aaKnown RBP22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 CST3P01034 146 aaPredicted RBP22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 NFICP08651 508 aa22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 TBXAS1P24557 533 aaPredicted RBP22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 THPOP40225 353 aa22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 MAGEA1P43355 309 aa22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 NOP14P78316 857 aaKnown RBP22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 BMS1Q14692 1282 aaKnown RBP22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 SGSM1Q2NKQ1 1148 aa22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 C10orf76Q5T2E6 689 aa22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 SMYD5Q6GMV2 418 aa22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 SYT11Q9BT88 431 aa22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 SEZ6LQ9BYH1 1024 aa22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 UNC93B1Q9H1C4 597 aa22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 NOD1Q9Y239 953 aa22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 DERAQ9Y315 318 aa22.56■■□□□ 1.2
MAP1LC3A-201ENST00000360668 A0A087X0T9 212 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 A0A0U1RQG5 324 aaPredicted RBP22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 KBTBD13C9JR72 458 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 CAND2O75155 1236 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 RPS6KA5O75582 802 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 FAM228BP0C875 321 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 YARSP54577 528 aaKnown RBP22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 CUL2Q13617 745 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 TMEM132DQ14C87 1099 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 FAM26DQ5JW98 314 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 UBXN11Q5T124 520 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 PAK6Q9NQU5 681 aaPredicted RBP22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 STARD7Q9NQZ5 370 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 TRMT13Q9NUP7 481 aaKnown RBP22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 SNTG2Q9NY99 539 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 KRT86O43790 486 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 KIF5CO60282 957 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 CTSHP09668 335 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 MYL6P60660 151 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 KIF5AQ12840 1032 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 TRIM71Q2Q1W2 868 aaKnown RBP22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 SPOPLQ6IQ16 392 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 DHX38Q92620 1227 aaKnown RBP22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 TAF4BQ92750 862 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 ZNF333Q96JL9 665 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 SNX27Q96L92 541 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 CHST12Q9NRB3 414 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 MYO1AQ9UBC5 1043 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 NENFQ9UMX5 172 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 NUB1Q9Y5A7 615 aa22.55■■□□□ 1.2
MAP1LC3A-201ENST00000360668 PJA2O43164 708 aa22.54■■□□□ 1.2
MAP1LC3A-201ENST00000360668 USP8P40818 1118 aa22.54■■□□□ 1.2
MAP1LC3A-201ENST00000360668 CCDC122Q5T0U0 273 aa22.54■■□□□ 1.2
MAP1LC3A-201ENST00000360668 SYT10Q6XYQ8 523 aa22.54■■□□□ 1.2
MAP1LC3A-201ENST00000360668 C1orf127Q8N9H9 656 aa22.54■■□□□ 1.2
MAP1LC3A-201ENST00000360668 SLC30A5Q8TAD4 765 aa22.54■■□□□ 1.2
MAP1LC3A-201ENST00000360668 ZNF592Q92610 1267 aa22.54■■□□□ 1.2
MAP1LC3A-201ENST00000360668 ELMO3Q96BJ8 720 aa22.54■■□□□ 1.2
MAP1LC3A-201ENST00000360668 NAGPAQ9UK23 515 aa22.54■■□□□ 1.2
MAP1LC3A-201ENST00000360668 ST3GAL5Q9UNP4 418 aa22.54■■□□□ 1.2
MAP1LC3A-201ENST00000360668 ATP8B3O60423 1300 aa22.54■■□□□ 1.2
MAP1LC3A-201ENST00000360668 RCCD1A6NED2 376 aa22.53■■□□□ 1.2
MAP1LC3A-201ENST00000360668 DNM1LO00429 736 aa22.53■■□□□ 1.2
MAP1LC3A-201ENST00000360668 DDX3XO00571 662 aaKnown RBP eCLIP22.53■■□□□ 1.2
MAP1LC3A-201ENST00000360668 RIOK3O14730 519 aaKnown RBP22.53■■□□□ 1.2
MAP1LC3A-201ENST00000360668 GPR182O15218 404 aa22.53■■□□□ 1.2
MAP1LC3A-201ENST00000360668 GNG11P61952 73 aa22.53■■□□□ 1.2
MAP1LC3A-201ENST00000360668 OLIG1Q8TAK6 271 aa22.53■■□□□ 1.2
MAP1LC3A-201ENST00000360668 FAXDC2Q96IV6 333 aa22.53■■□□□ 1.2
MAP1LC3A-201ENST00000360668 TSPAN18Q96SJ8 248 aa22.53■■□□□ 1.2
MAP1LC3A-201ENST00000360668 AGPAT1Q99943 283 aa22.53■■□□□ 1.2
MAP1LC3A-201ENST00000360668 LACRTQ9GZZ8 138 aa22.53■■□□□ 1.2
MAP1LC3A-201ENST00000360668 NXF3Q9H4D5 531 aaKnown RBP22.53■■□□□ 1.2
MAP1LC3A-201ENST00000360668 SIX4Q9UIU6 781 aa22.53■■□□□ 1.2
MAP1LC3A-201ENST00000360668 ARVCFO00192 962 aa22.52■■□□□ 1.2
MAP1LC3A-201ENST00000360668 CYP26A1O43174 497 aa22.52■■□□□ 1.2
MAP1LC3A-201ENST00000360668 ABL1P00519 1130 aa22.52■■□□□ 1.2
MAP1LC3A-201ENST00000360668 NAB2Q15742 525 aa22.52■■□□□ 1.2
MAP1LC3A-201ENST00000360668 ZNF699Q32M78 642 aa22.52■■□□□ 1.2
MAP1LC3A-201ENST00000360668 ALKAL1Q6UXT8 129 aa22.52■■□□□ 1.2
MAP1LC3A-201ENST00000360668 CXorf38Q8TB03 319 aa22.52■■□□□ 1.2
MAP1LC3A-201ENST00000360668 KIF12Q96FN5 646 aa22.52■■□□□ 1.2
MAP1LC3A-201ENST00000360668 ARID3AQ99856 593 aa22.52■■□□□ 1.2
MAP1LC3A-201ENST00000360668 NIF3L1Q9GZT8 377 aa22.52■■□□□ 1.2
MAP1LC3A-201ENST00000360668 XYLT2Q9H1B5 865 aa22.52■■□□□ 1.2
MAP1LC3A-201ENST00000360668 CNTN3Q9P232 1028 aa22.52■■□□□ 1.2
MAP1LC3A-201ENST00000360668 ITGA11Q9UKX5 1188 aa22.52■■□□□ 1.2
MAP1LC3A-201ENST00000360668 SQORQ9Y6N5 450 aa22.52■■□□□ 1.2
MAP1LC3A-201ENST00000360668 UQCRHLA0A096LP55 91 aa22.51■■□□□ 1.19
MAP1LC3A-201ENST00000360668 DYNC1I1O14576 645 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms