RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 KIF12Q96FN5 646 aa26.81■■□□□ 1.88
SHARPIN-201ENST00000359551 FTHL17Q9BXU8 183 aa26.81■■□□□ 1.88
SHARPIN-201ENST00000359551 WNT8AQ9H1J5 351 aa26.81■■□□□ 1.88
SHARPIN-201ENST00000359551 CST3P01034 146 aaPredicted RBP26.8■■□□□ 1.88
SHARPIN-201ENST00000359551 ITGA4P13612 1032 aa26.8■■□□□ 1.88
SHARPIN-201ENST00000359551 CDK17Q00537 523 aa26.8■■□□□ 1.88
SHARPIN-201ENST00000359551 TSR1Q2NL82 804 aaKnown RBP26.8■■□□□ 1.88
SHARPIN-201ENST00000359551 E4F1Q66K89 784 aaPredicted RBP26.8■■□□□ 1.88
SHARPIN-201ENST00000359551 SCARA3Q6AZY7 606 aa26.8■■□□□ 1.88
SHARPIN-201ENST00000359551 PI4K2AQ9BTU6 479 aa26.8■■□□□ 1.88
SHARPIN-201ENST00000359551 SIX4Q9UIU6 781 aa26.8■■□□□ 1.88
SHARPIN-201ENST00000359551 ASS1P00966 412 aaKnown RBP26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 CLTBP09497 229 aa26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 ATF7P17544 494 aaPredicted RBP26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 GCNT1Q02742 428 aa26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 WDR44Q5JSH3 913 aa26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 RTN4RL1Q86UN2 441 aaPredicted RBP26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 FAM81BQ96LP2 452 aa26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 SPAG5Q96R06 1193 aa26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 GPR88Q9GZN0 384 aa26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 UBE2TQ9NPD8 197 aaPredicted RBP26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 AIPL1Q9NZN9 384 aa26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 SMIM28A0A1B0GU29 152 aa26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 CXCL10P02778 98 aa26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 LINC01599Q8WXQ3 324 aa26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 C1orf112Q9NSG2 853 aa26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 KLK14Q9P0G3 267 aa26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 ITGA11Q9UKX5 1188 aa26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 GIT1Q9Y2X7 761 aa26.79■■□□□ 1.88
SHARPIN-201ENST00000359551 C9IYK1 514 aa26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 F8VZ95 297 aa26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 RAPGEF1Q13905 1077 aa26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 SGSM1Q2NKQ1 1148 aa26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 COL13A1Q5TAT6 717 aaPredicted RBP26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 SFMBT2Q5VUG0 894 aa26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 ENOSF1Q7L5Y1 443 aa26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 ZNF598Q86UK7 904 aaKnown RBP26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 TMTC1Q8IUR5 882 aa26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 APBB2Q92870 758 aa26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 TATDN2Q93075 761 aa26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 KREMEN1Q96MU8 473 aa26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 XYLT2Q9H1B5 865 aa26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 TSPYL2Q9H2G4 693 aaPredicted RBP26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 APOBEC3GQ9HC16 384 aaKnown RBP26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 ZNHIT6Q9NWK9 470 aaKnown RBP26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 DPP3Q9NY33 737 aa26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 TDRD15B5MCY1 1934 aaKnown RBP26.78■■□□□ 1.88
SHARPIN-201ENST00000359551 MEIS3P2A8K0S8 358 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 MYL6P60660 151 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 NOP14P78316 857 aaKnown RBP26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 FAM189BP81408 668 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 TRPC3Q13507 836 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 DRAP1Q14919 205 aaPredicted RBP26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 CYP26C1Q6V0L0 522 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 AGMOQ6ZNB7 445 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 SLC24A5Q71RS6 500 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 ECHDC2Q86YB7 292 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 PPM1KQ8N3J5 372 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 DBF4BQ8NFT6 615 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 SEPT8Q92599 483 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 TAF4BQ92750 862 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 PPP1R12CQ9BZL4 782 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 IMPG2Q9BZV3 1241 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 TMEM39AQ9NV64 488 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 UBQLN1Q9UMX0 589 aaKnown RBP26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 ALPK3Q96L96 1907 aa26.77■■□□□ 1.88
SHARPIN-201ENST00000359551 ARHGAP6O43182 974 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 ITGB3P05106 788 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 CYP2C18P33260 490 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 MFAP3P55082 362 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 PGBD4Q96DM1 585 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 SCLYQ96I15 445 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 PYCARDQ9ULZ3 195 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 SCN1AP35498 2009 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 MICAL3Q7RTP6 2002 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 PTGESO14684 152 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 XPOTO43592 962 aaKnown RBP26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 CYP3A5P20815 502 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 STAT1P42224 750 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 KCNJ6P48051 423 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 GLRA4Q5JXX5 417 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 SPOPLQ6IQ16 392 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 FMNL3Q8IVF7 1028 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 GSTCDQ8NEC7 633 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 BEST2Q8NFU1 509 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 KAT5Q92993 513 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 CHP1Q99653 195 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 VRTNQ9H8Y1 702 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 UBN1Q9NPG3 1134 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.76■■□□□ 1.872e-6■■■■■ 48.7
SHARPIN-201ENST00000359551 NUB1Q9Y5A7 615 aa26.76■■□□□ 1.87
SHARPIN-201ENST00000359551 STAU1O95793 577 aaKnown RBP26.75■■□□□ 1.87
SHARPIN-201ENST00000359551 EN2P19622 333 aaPredicted RBP26.75■■□□□ 1.87
SHARPIN-201ENST00000359551 ATICP31939 592 aa26.75■■□□□ 1.87
SHARPIN-201ENST00000359551 SOX5P35711 763 aa26.75■■□□□ 1.87
SHARPIN-201ENST00000359551 CCL23P55773 120 aa26.75■■□□□ 1.87
SHARPIN-201ENST00000359551 HGSNATQ68CP4 663 aa26.75■■□□□ 1.87
SHARPIN-201ENST00000359551 ZSCAN30Q86W11 494 aa26.75■■□□□ 1.87
SHARPIN-201ENST00000359551 SHC3Q92529 594 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms