RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 MKRN4PQ13434 485 aaPredicted RBP19.31■□□□□ 0.68
SHANK1-202ENST00000359082 NBPF20Q3BBV1 942 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 TRIM60Q495X7 471 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 CD274Q9NZQ7 290 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 PCDHA10Q9Y5I2 948 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 CDK12Q9NYV4 1490 aaPredicted RBP19.31■□□□□ 0.68
SHANK1-202ENST00000359082 TBC1D4O60343 1298 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 SRP72O76094 671 aaKnown RBP19.31■□□□□ 0.68
SHANK1-202ENST00000359082 APOA1P02647 267 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 DEPDC1Q5TB30 811 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 CLEC4FQ8N1N0 589 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 ASCC2Q9H1I8 757 aaPredicted RBP19.31■□□□□ 0.68
SHANK1-202ENST00000359082 MTMR2Q13614 643 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 IL31Q6EBC2 164 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 CATSPER1Q8NEC5 780 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 TMEM117Q9H0C3 514 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 TASP1Q9H6P5 420 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 KLC4Q9NSK0 619 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 EEF2KO00418 725 aaKnown RBP19.31■□□□□ 0.68
SHANK1-202ENST00000359082 APRTP07741 180 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 GUCY1A2P33402 732 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 USP10Q14694 798 aaKnown RBP19.31■□□□□ 0.68
SHANK1-202ENST00000359082 NAA30Q147X3 362 aaPredicted RBP19.31■□□□□ 0.68
SHANK1-202ENST00000359082 WDR72Q3MJ13 1102 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 PTPRN2Q92932 1015 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 SENP7Q9BQF6 1050 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 TUFT1Q9NNX1 390 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 H0Y626 953 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 SERPINI2O75830 405 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 TRIM16O95361 564 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 EYA4O95677 639 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 SERPINB10P48595 397 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 CEP55Q53EZ4 464 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 PLEKHM3Q6ZWE6 761 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 LDHDQ86WU2 507 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 FAM118BQ9BPY3 351 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 OSBPL5Q9H0X9 879 aaPredicted RBP19.31■□□□□ 0.68
SHANK1-202ENST00000359082 PHF2O75151 1096 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 AKR1B1P15121 316 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 GUF1Q8N442 669 aaKnown RBP19.3■□□□□ 0.68
SHANK1-202ENST00000359082 ELP3Q9H9T3 547 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 PDGFRBP09619 1106 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 USP11P51784 963 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 MRPS15P82914 257 aaKnown RBP19.3■□□□□ 0.68
SHANK1-202ENST00000359082 SH2D3AQ9BRG2 576 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 PKP3Q9Y446 797 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 MAP3K4Q9Y6R4 1608 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 TADA2AO75478 443 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 CTSHP09668 335 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 TXNP10599 105 aaKnown RBP19.3■□□□□ 0.68
SHANK1-202ENST00000359082 GRIN1Q05586 938 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 EFHBQ8N7U6 833 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 ARL4DP49703 201 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 EPHA7Q15375 998 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 C18orf8Q96DM3 657 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 FOPNLQ96NB1 174 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 IGKV5-2P06315 115 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 CENPAP49450 140 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 TRADDQ15628 312 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 SNX9Q9Y5X1 595 aa19.3■□□□□ 0.68
SHANK1-202ENST00000359082 ASB14A6NK59 587 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 TCN1P20061 433 aaPredicted RBP19.29■□□□□ 0.68
SHANK1-202ENST00000359082 ATP2C1P98194 919 aaPredicted RBP19.29■□□□□ 0.68
SHANK1-202ENST00000359082 TMEM62Q0P6H9 643 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 NARFQ9UHQ1 456 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 ZBTB7AO95365 584 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 MYL2P10916 166 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 IMPDH2P12268 514 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 C6orf10Q5SRN2 563 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 MRPL1Q9BYD6 325 aaKnown RBP19.29■□□□□ 0.68
SHANK1-202ENST00000359082 ZNF556Q9HAH1 456 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 PCDHB8Q9UN66 801 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 CDYLQ9Y232 598 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 FAM32AQ9Y421 112 aaKnown RBP19.29■□□□□ 0.68
SHANK1-202ENST00000359082 SLC16A3O15427 465 aaKnown RBP19.29■□□□□ 0.68
SHANK1-202ENST00000359082 STAT5BP51692 787 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 HMGCS2P54868 508 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 ST8SIA6P61647 398 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 C4orf33Q8N1A6 199 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 SPATA4Q8NEY3 305 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 SEPT5Q99719 369 aaPredicted RBP19.29■□□□□ 0.68
SHANK1-202ENST00000359082 NDUFS3O75489 264 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 WBP4O75554 376 aaKnown RBP19.29■□□□□ 0.68
SHANK1-202ENST00000359082 ALDH1A1P00352 501 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 GSG1L2A8MUP6 293 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 PSMD3O43242 534 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 ARHGAP18Q8N392 663 aa19.29■□□□□ 0.68
SHANK1-202ENST00000359082 GRAP2O75791 330 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 FKBP9O95302 570 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 EFNA5P52803 228 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 STX3Q13277 289 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 SYDE1Q6ZW31 735 aaPredicted RBP19.28■□□□□ 0.68
SHANK1-202ENST00000359082 FKBP9P1Q75LS8 142 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 PODNQ7Z5L7 613 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 C20orf96Q9NUD7 363 aaPredicted RBP19.28■□□□□ 0.68
SHANK1-202ENST00000359082 ZC3H7BQ9UGR2 993 aaKnown RBP19.28■□□□□ 0.68
SHANK1-202ENST00000359082 NCAPD2Q15021 1401 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 RASSF10A6NK89 507 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 SOAT1P35610 550 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 TMEM132DQ14C87 1099 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms