RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 FMO5P49326 533 aa27.44■■□□□ 1.98
SSBP3-202ENST00000357475 GRIK3Q13003 919 aa27.44■■□□□ 1.98
SSBP3-202ENST00000357475 DUOXA2Q1HG44 320 aa27.44■■□□□ 1.98
SSBP3-202ENST00000357475 TRAPPC11Q7Z392 1133 aa27.44■■□□□ 1.98
SSBP3-202ENST00000357475 URGCPQ8TCY9 931 aa27.44■■□□□ 1.98
SSBP3-202ENST00000357475 SLC9A7Q96T83 725 aa27.44■■□□□ 1.98
SSBP3-202ENST00000357475 DPP3Q9NY33 737 aa27.44■■□□□ 1.98
SSBP3-202ENST00000357475 SIX4Q9UIU6 781 aa27.44■■□□□ 1.98
SSBP3-202ENST00000357475 CASTOR2A6NHX0 329 aa27.43■■□□□ 1.98
SSBP3-202ENST00000357475 PES1O00541 588 aaKnown RBP27.43■■□□□ 1.98
SSBP3-202ENST00000357475 VNN1O95497 513 aa27.43■■□□□ 1.98
SSBP3-202ENST00000357475 ZACNQ401N2 412 aa27.43■■□□□ 1.98
SSBP3-202ENST00000357475 USP37Q86T82 979 aa27.43■■□□□ 1.98
SSBP3-202ENST00000357475 ANKRD20A12PQ8NF67 263 aa27.43■■□□□ 1.98
SSBP3-202ENST00000357475 TMEM8AQ9HCN3 771 aa27.43■■□□□ 1.98
SSBP3-202ENST00000357475 RNF216Q9NWF9 866 aaPredicted RBP27.43■■□□□ 1.98
SSBP3-202ENST00000357475 IFNKQ9P0W0 207 aa27.43■■□□□ 1.98
SSBP3-202ENST00000357475 DNAJB4Q9UDY4 337 aa27.43■■□□□ 1.98
SSBP3-202ENST00000357475 UBQLN1Q9UMX0 589 aaKnown RBP27.43■■□□□ 1.98
SSBP3-202ENST00000357475 TEX33O43247 280 aa27.42■■□□□ 1.98
SSBP3-202ENST00000357475 CST3P01034 146 aaPredicted RBP27.42■■□□□ 1.98
SSBP3-202ENST00000357475 MXI1P50539 228 aa27.42■■□□□ 1.98
SSBP3-202ENST00000357475 RABGGTBP53611 331 aa27.42■■□□□ 1.98
SSBP3-202ENST00000357475 PLCB2Q00722 1185 aa27.42■■□□□ 1.98
SSBP3-202ENST00000357475 TAS1R2Q8TE23 839 aa27.42■■□□□ 1.98
SSBP3-202ENST00000357475 SEMA4DQ92854 862 aa27.42■■□□□ 1.98
SSBP3-202ENST00000357475 ANKRD36BP1Q96IX9 119 aa27.42■■□□□ 1.98
SSBP3-202ENST00000357475 MTIF3Q9H2K0 278 aaKnown RBP27.42■■□□□ 1.98
SSBP3-202ENST00000357475 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.42■■□□□ 1.986e-7■■■■■ 128.1
SSBP3-202ENST00000357475 LGALS16A8MUM7 142 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 TNNC2P02585 160 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 ITGB3P05106 788 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 GTF2H1P32780 548 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 HTRA4P83105 476 aaPredicted RBP27.41■■□□□ 1.98
SSBP3-202ENST00000357475 MYL7Q01449 175 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 BIRC3Q13489 604 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 NT5DC4Q86YG4 428 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 PHOSPHO2Q8TCD6 241 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 YME1L1Q96TA2 773 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 NRDE2Q9H7Z3 1164 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 A0A1B0GTH6 734 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 F8W810 466 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 RNASELQ05823 741 aaKnown RBP27.41■■□□□ 1.98
SSBP3-202ENST00000357475 DSC1Q08554 894 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 KRT39Q6A163 491 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 BEST2Q8NFU1 509 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 CACTINQ8WUQ7 758 aaKnown RBP27.41■■□□□ 1.98
SSBP3-202ENST00000357475 CRACR2AQ9BSW2 395 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 ZBED2Q9BTP6 218 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 CWH43Q9H720 699 aa27.41■■□□□ 1.98
SSBP3-202ENST00000357475 RTN4Q9NQC3 1192 aaKnown RBP27.41■■□□□ 1.98
SSBP3-202ENST00000357475 LCHNA4D1U4 455 aa27.4■■□□□ 1.98
SSBP3-202ENST00000357475 MYOGP15173 224 aa27.4■■□□□ 1.98
SSBP3-202ENST00000357475 POLR2BP30876 1174 aaKnown RBP27.4■■□□□ 1.98
SSBP3-202ENST00000357475 PBX3P40426 434 aa27.4■■□□□ 1.98
SSBP3-202ENST00000357475 CLCNKBP51801 687 aa27.4■■□□□ 1.98
SSBP3-202ENST00000357475 TUSC3Q13454 348 aa27.4■■□□□ 1.98
SSBP3-202ENST00000357475 COLGALT2Q8IYK4 626 aa27.4■■□□□ 1.98
SSBP3-202ENST00000357475 TSPAN18Q96SJ8 248 aa27.4■■□□□ 1.98
SSBP3-202ENST00000357475 XPO4Q9C0E2 1151 aaKnown RBP27.4■■□□□ 1.98
SSBP3-202ENST00000357475 SLC38A7Q9NVC3 462 aa27.4■■□□□ 1.98
SSBP3-202ENST00000357475 KANSL3Q9P2N6 904 aa27.4■■□□□ 1.98
SSBP3-202ENST00000357475 GOLGA6L3A6NEY3 463 aa27.39■■□□□ 1.98
SSBP3-202ENST00000357475 STX10O60499 249 aa27.39■■□□□ 1.98
SSBP3-202ENST00000357475 HLA-DRAP01903 254 aa27.39■■□□□ 1.98
SSBP3-202ENST00000357475 KRT19P08727 400 aa27.39■■□□□ 1.98
SSBP3-202ENST00000357475 AP3M2P53677 418 aa27.39■■□□□ 1.98
SSBP3-202ENST00000357475 UBASH3AP57075 661 aa27.39■■□□□ 1.98
SSBP3-202ENST00000357475 APBA1Q02410 837 aa27.39■■□□□ 1.98
SSBP3-202ENST00000357475 BTG3Q14201 252 aaPredicted RBP27.39■■□□□ 1.98
SSBP3-202ENST00000357475 UVSSAQ2YD98 709 aa27.39■■□□□ 1.98
SSBP3-202ENST00000357475 EPC2Q52LR7 807 aa27.39■■□□□ 1.98
SSBP3-202ENST00000357475 LRRC43Q8N309 656 aa27.39■■□□□ 1.98
SSBP3-202ENST00000357475 C3orf58Q8NDZ4 430 aa27.39■■□□□ 1.98
SSBP3-202ENST00000357475 PI4K2AQ9BTU6 479 aa27.39■■□□□ 1.98
SSBP3-202ENST00000357475 MRPL42Q9Y6G3 142 aaKnown RBP27.39■■□□□ 1.98
SSBP3-202ENST00000357475 PHACTR2O75167 634 aa27.38■■□□□ 1.97
SSBP3-202ENST00000357475 CYP3A5P20815 502 aa27.38■■□□□ 1.97
SSBP3-202ENST00000357475 BMP8BP34820 402 aa27.38■■□□□ 1.97
SSBP3-202ENST00000357475 KLK7P49862 253 aa27.38■■□□□ 1.97
SSBP3-202ENST00000357475 NR1I3Q14994 352 aa27.38■■□□□ 1.97
SSBP3-202ENST00000357475 C9orf57Q5W0N0 161 aa27.38■■□□□ 1.97
SSBP3-202ENST00000357475 CHRDL2Q6WN34 429 aa27.38■■□□□ 1.97
SSBP3-202ENST00000357475 CMTR2Q8IYT2 770 aaKnown RBP27.38■■□□□ 1.97
SSBP3-202ENST00000357475 MRPL9Q9BYD2 267 aaKnown RBP27.38■■□□□ 1.97
SSBP3-202ENST00000357475 AGAP1Q9UPQ3 857 aa27.38■■□□□ 1.97
SSBP3-202ENST00000357475 ANO9A1A5B4 782 aa27.37■■□□□ 1.97
SSBP3-202ENST00000357475 TLL1O43897 1013 aa27.37■■□□□ 1.97
SSBP3-202ENST00000357475 ZC3H11AO75152 810 aaKnown RBP eCLIP27.37■■□□□ 1.97
SSBP3-202ENST00000357475 TPM2P07951 284 aa27.37■■□□□ 1.97
SSBP3-202ENST00000357475 LRPAP1P30533 357 aa27.37■■□□□ 1.97
SSBP3-202ENST00000357475 PIK3CAP42336 1068 aa27.37■■□□□ 1.97
SSBP3-202ENST00000357475 MYL6P60660 151 aa27.37■■□□□ 1.97
SSBP3-202ENST00000357475 UBXN1Q04323 297 aa27.37■■□□□ 1.97
SSBP3-202ENST00000357475 KCNMA1Q12791 1236 aa27.37■■□□□ 1.97
SSBP3-202ENST00000357475 NCOA4Q13772 614 aa27.37■■□□□ 1.97
SSBP3-202ENST00000357475 GSE1Q14687 1217 aa27.37■■□□□ 1.97
SSBP3-202ENST00000357475 SARM1Q6SZW1 724 aa27.37■■□□□ 1.97
SSBP3-202ENST00000357475 LMO3Q8TAP4 145 aa27.37■■□□□ 1.97
SSBP3-202ENST00000357475 PRO3102Q9H379 93 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms