RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 KANSL3Q9P2N6 904 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 SEL1LQ9UBV2 794 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 SMG5Q9UPR3 1016 aaKnown RBP12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 FRMD4BQ9Y2L6 1034 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 LOXHD1Q8IVV2 1947 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 FAM86B1E9PN63 330 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 FAM86B2P0C5J1 330 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 RRM1P23921 792 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 KLF1Q13351 362 aaPredicted RBP12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 RASA2Q15283 850 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 PLEKHG4Q58EX7 1191 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 ZNF746Q6NUN9 644 aaPredicted RBP12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 PRUNE1Q86TP1 453 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 CCDC125Q86Z20 511 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 CLEC10AQ8IUN9 316 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 ZNF276Q8N554 614 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 HSD17B14Q9BPX1 270 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 CCDC77Q9BR77 488 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 FOXP3Q9BZS1 431 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 FAM192AQ9GZU8 254 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 UBE2TQ9NPD8 197 aaPredicted RBP12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 LRRC4BQ9NT99 713 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 SFI1A8K8P3 1242 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 PMM2O15305 246 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 TJP3O95049 919 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 ATF2P15336 505 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 SLC16A2P36021 539 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 FMO1Q01740 532 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 PRR16Q569H4 304 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 ZNF449Q6P9G9 518 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 DSTYKQ6XUX3 929 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 OTOAQ7RTW8 1153 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 ATL2Q8NHH9 583 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 MAIP1Q8WWC4 291 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 EPAS1Q99814 870 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 EIF2AK1Q9BQI3 630 aaKnown RBP12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 KIAA1586Q9HCI6 787 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 PCMTD2Q9NV79 361 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 DNAJC17Q9NVM6 304 aaKnown RBP12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 SENP1Q9P0U3 644 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 SCOCQ9UIL1 159 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 EML1O00423 815 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 SGPL1O95470 568 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 GAS8O95995 478 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 CENPCQ03188 943 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 ADCY1Q08828 1119 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 C1orf220Q5T0J3 134 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 RBM26Q5T8P6 1007 aaKnown RBP12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 BBOF1Q8ND07 529 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 SCG3Q8WXD2 468 aaKnown RBP12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 ATG4AQ8WYN0 398 aa12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 SSU72Q9NP77 194 aaKnown RBP12.87□□□□□ -0.35
SMARCAL1-201ENST00000357276 MSH4O15457 936 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 EXOC3O60645 756 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 SKIP12755 728 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 SREBF1P36956 1147 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 LAMB3Q13751 1172 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 QRICH1Q2TAL8 776 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 ACSBG2Q5FVE4 666 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 NLRP9Q7RTR0 991 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 KSR1Q8IVT5 923 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 ZCCHC9Q8N567 271 aaKnown RBP12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 SETDB2Q96T68 719 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 PLVAPQ9BX97 442 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 PARVGQ9HBI0 331 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 STX18Q9P2W9 335 aaKnown RBP12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 ZFP69BQ9UJL9 534 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 F5H6K3 240 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 ATP9AO75110 1047 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 MYBL1P10243 752 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 KLRC2P26717 231 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 CDR2Q01850 454 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 SLC34A1Q06495 639 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 AP1B1Q10567 949 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 TMED2Q15363 201 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 SLC1A5Q15758 541 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 MYCT1Q8N699 235 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 EZH1Q92800 747 aaPredicted RBP12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 PTPRN2Q92932 1015 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 FAM210AQ96ND0 272 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 BTBD10Q9BSF8 475 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 MMADHCQ9H3L0 296 aaPredicted RBP12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 TBC1D30Q9Y2I9 924 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 MAGEA13PA6NCF6 341 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 GSC2O15499 205 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 SPAG7O75391 227 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 FAM13AO94988 1023 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 RPA3P35244 121 aaPredicted RBP12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 CYP2J2P51589 502 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 DLG4P78352 724 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 GSTA3Q16772 222 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 ZC3H12AQ5D1E8 599 aaKnown RBP12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 DPP8Q6V1X1 898 aaPredicted RBP12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 LRRC74BQ6ZQY2 392 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 HS2ST1Q7LGA3 356 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 SLC51AQ86UW1 340 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 C9orf72Q96LT7 481 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 TRIM4Q9C037 500 aa12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 TRABDQ9H4I3 376 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms