RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 NCBP1Q09161 790 aaKnown RBP4.36□□□□□ -1.71
LIG4-201ENST00000356922 CAMK1Q14012 370 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 TRAPPC11Q7Z392 1133 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 COLGALT2Q8IYK4 626 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 APBB2Q92870 758 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 KIF12Q96FN5 646 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 ADPGKQ9BRR6 497 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 C17orf80Q9BSJ5 609 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 ACP6Q9NPH0 428 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 KCNG1Q9UIX4 513 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 SLC4A7Q9Y6M7 1214 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 FAM170AA1A519 330 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 FSD2A1L4K1 749 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 ITGB3P05106 788 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 CA3P07451 260 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 PNMA6AP0CW24 399 aaPredicted RBP4.36□□□□□ -1.71
LIG4-201ENST00000356922 KCNE1P15382 129 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 TNNI1P19237 187 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 BRCC3P46736 316 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 CDH8P55286 799 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 BCAR1P56945 870 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 MYL6P60660 151 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 GOLGA8FQ08AF8 430 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 GOLGA8DPQ0D2H9 430 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 LRMPQ12912 555 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 STIM1Q13586 685 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 UPP1Q16831 310 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 DCAF4L1Q3SXM0 396 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 NOMO2Q5JPE7 1267 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 TCERG1LQ5VWI1 586 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 PHLDB3Q6NSJ2 640 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 STXBP4Q6ZWJ1 553 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 RNPC3Q96LT9 517 aaKnown RBP4.36□□□□□ -1.71
LIG4-201ENST00000356922 GPR62Q9BZJ7 368 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 ARMCX3Q9UH62 379 aaPredicted RBP4.36□□□□□ -1.71
LIG4-201ENST00000356922 TIMM13Q9Y5L4 95 aaPredicted RBP4.36□□□□□ -1.71
LIG4-201ENST00000356922 BICDL2A1A5D9 508 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 NRP1O14786 923 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 NOL4O94818 638 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 KIF4AO95239 1232 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 PARNO95453 639 aaKnown RBP4.36□□□□□ -1.71
LIG4-201ENST00000356922 GALTP07902 379 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 SLC11A1P49279 550 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 MYBPC2Q14324 1141 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 ZACNQ401N2 412 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 RSPO2Q6UXX9 243 aaPredicted RBP4.36□□□□□ -1.71
LIG4-201ENST00000356922 FRMD5Q7Z6J6 570 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 LRCH3Q96II8 777 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 CEP63Q96MT8 703 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 CCDC94Q9BW85 323 aaPredicted RBP4.36□□□□□ -1.71
LIG4-201ENST00000356922 SDCBP2Q9H190 292 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 NDST4Q9H3R1 872 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 THAP9Q9H5L6 903 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 ELAC1Q9H777 363 aaKnown RBP4.36□□□□□ -1.71
LIG4-201ENST00000356922 ALG13Q9NP73 1137 aaKnown RBP4.36□□□□□ -1.71
LIG4-201ENST00000356922 SIX2Q9NPC8 291 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 MARCH5Q9NX47 278 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 LIMA1Q9UHB6 759 aaKnown RBP4.36□□□□□ -1.71
LIG4-201ENST00000356922 FRMD4BQ9Y2L6 1034 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 GIT1Q9Y2X7 761 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 PRG3Q9Y2Y8 225 aaPredicted RBP4.36□□□□□ -1.71
LIG4-201ENST00000356922 NUB1Q9Y5A7 615 aa4.36□□□□□ -1.71
LIG4-201ENST00000356922 ANO9A1A5B4 782 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 LINC01553A4QN01 128 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 PIRO00625 290 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 INPPL1O15357 1258 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 ZC3H11AO75152 810 aaKnown RBP eCLIP4.35□□□□□ -1.71
LIG4-201ENST00000356922 EFEMP2O95967 443 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 THP07101 528 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 RPL13P26373 211 aaKnown RBP4.35□□□□□ -1.71
LIG4-201ENST00000356922 POLR2BP30876 1174 aaKnown RBP4.35□□□□□ -1.71
LIG4-201ENST00000356922 FMO5P49326 533 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 FANCCQ00597 558 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 NR1I3Q14994 352 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 CCDC40Q4G0X9 1142 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 FOXR2Q6PJQ5 311 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 NPAS4Q8IUM7 802 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 ARHGEF19Q8IW93 802 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 AUTS2Q8WXX7 1259 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 CCDC51Q96ER9 411 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 TSG101Q99816 390 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 XPO4Q9C0E2 1151 aaKnown RBP4.35□□□□□ -1.71
LIG4-201ENST00000356922 DPP3Q9NY33 737 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 IFNKQ9P0W0 207 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 POLIQ9UNA4 740 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 TDRD15B5MCY1 1934 aaKnown RBP4.35□□□□□ -1.71
LIG4-201ENST00000356922 BECN2A8MW95 431 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 TLL1O43897 1013 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 BAIAP3O94812 1187 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 LDHAP00338 332 aaKnown RBP4.35□□□□□ -1.71
LIG4-201ENST00000356922 PFKMP08237 780 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 COPB1P53618 953 aaKnown RBP4.35□□□□□ -1.71
LIG4-201ENST00000356922 LILRA4P59901 499 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 SNRPFP62306 86 aaKnown RBP4.35□□□□□ -1.71
LIG4-201ENST00000356922 PLCB2Q00722 1185 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 ORC1Q13415 861 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 TMEM132DQ14C87 1099 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 TPD52L1Q16890 204 aaPredicted RBP4.35□□□□□ -1.71
LIG4-201ENST00000356922 VWA3BQ502W6 1294 aa4.35□□□□□ -1.71
LIG4-201ENST00000356922 TIGD5Q53EQ6 642 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms