RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 SLC39A4Q6P5W5 647 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 Q7L0L9 218 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 EPM2AIP1Q7L775 607 aaPredicted RBP4.33□□□□□ -1.72
CNOT4-202ENST00000356162 CDR2LQ86X02 465 aaPredicted RBP4.33□□□□□ -1.72
CNOT4-202ENST00000356162 LINC00528Q8N1L1 170 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 GDPD5Q8WTR4 605 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 ARNTL2Q8WYA1 636 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 TSPAN18Q96SJ8 248 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 C17orf80Q9BSJ5 609 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 GTPBP4Q9BZE4 634 aaKnown RBP4.33□□□□□ -1.72
CNOT4-202ENST00000356162 BLZF1Q9H2G9 400 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 TMEM206Q9H813 350 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 TOPORSQ9NS56 1045 aaPredicted RBP4.33□□□□□ -1.72
CNOT4-202ENST00000356162 SNTG2Q9NY99 539 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 LMCD1Q9NZU5 365 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 CGNQ9P2M7 1197 aaKnown RBP4.33□□□□□ -1.72
CNOT4-202ENST00000356162 ANKFY1Q9P2R3 1169 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 STK39Q9UEW8 545 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 PARP2Q9UGN5 583 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 LZTS1Q9Y250 596 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 INPP5FQ9Y2H2 1132 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 PCDHB12Q9Y5F1 795 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 STYXL1Q9Y6J8 313 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 DNAH12Q6ZR08 3092 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 A0A0B4J269 797 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 ARL5CA6NH57 179 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 H3BNC9 293 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 KINO60870 393 aaKnown RBP4.33□□□□□ -1.72
CNOT4-202ENST00000356162 RHOBTB3O94955 611 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 KIF20AO95235 890 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 RPN1P04843 607 aaKnown RBP4.33□□□□□ -1.72
CNOT4-202ENST00000356162 CLTAP09496 248 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 HARSP12081 509 aaKnown RBP4.33□□□□□ -1.72
CNOT4-202ENST00000356162 FOSL2P15408 326 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 POU3F3P20264 500 aaPredicted RBP4.33□□□□□ -1.72
CNOT4-202ENST00000356162 MATR3P43243 847 aaKnown RBP eCLIP4.33□□□□□ -1.72
CNOT4-202ENST00000356162 SCNN1GP51170 649 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 CASP5P51878 434 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 PLCB3Q01970 1234 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 DSC1Q08554 894 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 GPM6BQ13491 265 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 SNW1Q13573 536 aaKnown RBP4.33□□□□□ -1.72
CNOT4-202ENST00000356162 GRIN2CQ14957 1233 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 PTPROQ16827 1216 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 ZC2HC1CQ53FD0 456 aaPredicted RBP4.33□□□□□ -1.72
CNOT4-202ENST00000356162 XKR4Q5GH76 650 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 C6orf118Q5T5N4 469 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 LRRC55Q6ZSA7 311 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 NPAS3Q8IXF0 933 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 SLC39A11Q8N1S5 342 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 FAM193BQ96PV7 902 aaPredicted RBP4.33□□□□□ -1.72
CNOT4-202ENST00000356162 GAD1Q99259 594 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 HERC2P3Q9BVR0 1158 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 FGFBP2Q9BYJ0 223 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 PRDM12Q9H4Q4 367 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 NRDE2Q9H7Z3 1164 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 TYW1Q9NV66 732 aaKnown RBP4.33□□□□□ -1.72
CNOT4-202ENST00000356162 RMND1Q9NWS8 449 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 TBC1D7Q9P0N9 293 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 CNTN3Q9P232 1028 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 USP20Q9Y2K6 914 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 STXBP5LQ9Y2K9 1186 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 HES2Q9Y543 173 aa4.33□□□□□ -1.72
CNOT4-202ENST00000356162 TRIP11Q15643 1979 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 TSC2P49815 1807 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 PTGESO14684 152 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 CLDN3O15551 220 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 WIPF1O43516 503 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 FAM189A1O60320 539 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 PRPF6O94906 941 aaKnown RBP4.32□□□□□ -1.72
CNOT4-202ENST00000356162 SMC2O95347 1197 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 KCNE1P15382 129 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 AKAP5P24588 427 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 CASP1P29466 404 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 SLC11A1P49279 550 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 BCAR1P56945 870 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 RNASELQ05823 741 aaKnown RBP4.32□□□□□ -1.72
CNOT4-202ENST00000356162 PPP2R3AQ06190 1150 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 DHX9Q08211 1270 aaKnown RBP4.32□□□□□ -1.72
CNOT4-202ENST00000356162 TUSC3Q13454 348 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 COBLL1Q53SF7 1204 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 KCNT2Q6UVM3 1135 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 Q6ZVU0 165 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 SPRED2Q7Z698 418 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 CD302Q8IX05 232 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 C12orf56Q8IXR9 622 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 COLGALT2Q8IYK4 626 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 THNSL1Q8IYQ7 743 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 SYCP3Q8IZU3 236 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 GOLGA5Q8TBA6 731 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 ZNF507Q8TCN5 953 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 MYLIPQ8WY64 445 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 MRPL38Q96DV4 380 aaKnown RBP4.32□□□□□ -1.72
CNOT4-202ENST00000356162 ZBTB45Q96K62 511 aaPredicted RBP4.32□□□□□ -1.72
CNOT4-202ENST00000356162 UROC1Q96N76 676 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 ACAP3Q96P50 834 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 CDX2Q99626 313 aaPredicted RBP4.32□□□□□ -1.72
CNOT4-202ENST00000356162 TCHPQ9BT92 498 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 MSTO1Q9BUK6 570 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 HAPLN2Q9GZV7 340 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms