RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 CAMTA2O94983 1202 aa18.97■□□□□ 0.63
COL18A1-202ENST00000355480 HMOX2P30519 316 aa18.97■□□□□ 0.63
COL18A1-202ENST00000355480 EXOSC10Q01780 885 aaKnown RBP18.97■□□□□ 0.63
COL18A1-202ENST00000355480 ADCK2Q7Z695 626 aa18.97■□□□□ 0.63
COL18A1-202ENST00000355480 MCEEQ96PE7 176 aa18.97■□□□□ 0.63
COL18A1-202ENST00000355480 CYP2C9P11712 490 aa18.97■□□□□ 0.63
COL18A1-202ENST00000355480 ATF7IP2Q5U623 682 aa18.97■□□□□ 0.63
COL18A1-202ENST00000355480 C16orf86Q6ZW13 317 aa18.97■□□□□ 0.63
COL18A1-202ENST00000355480 ZNF34Q8IZ26 560 aa18.97■□□□□ 0.63
COL18A1-202ENST00000355480 GPRC5AQ8NFJ5 357 aa18.97■□□□□ 0.63
COL18A1-202ENST00000355480 MAD2L2Q9UI95 211 aa18.97■□□□□ 0.63
COL18A1-202ENST00000355480 APRTP07741 180 aa18.97■□□□□ 0.63
COL18A1-202ENST00000355480 LINC00116Q8NCU8 138 aa18.97■□□□□ 0.63
COL18A1-202ENST00000355480 STKLD1Q8NE28 680 aa18.97■□□□□ 0.63
COL18A1-202ENST00000355480 MYCBPQ99417 103 aaPredicted RBP18.97■□□□□ 0.63
COL18A1-202ENST00000355480 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.97■□□□□ 0.63
COL18A1-202ENST00000355480 SETD1BQ9UPS6 1966 aaKnown RBP18.97■□□□□ 0.63
COL18A1-202ENST00000355480 EEF2KO00418 725 aaKnown RBP18.96■□□□□ 0.63
COL18A1-202ENST00000355480 MYBP10242 640 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 LRRC8EQ6NSJ5 796 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 KCND2Q9NZV8 630 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 ARHGAP10A1A4S6 786 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 CCDC78A2IDD5 438 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 MAPRE2Q15555 327 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 TSGA10IPQ3SY00 556 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 ZNF507Q8TCN5 953 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 FOPNLQ96NB1 174 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 PSMD3O43242 534 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 OR1G1P47890 313 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 HUNKP57058 714 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 FLOT2Q14254 428 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 SLC35G2Q8TBE7 412 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 OTUB1Q96FW1 271 aaPredicted RBP18.96■□□□□ 0.63
COL18A1-202ENST00000355480 MOV10L1Q9BXT6 1211 aaKnown RBP18.96■□□□□ 0.63
COL18A1-202ENST00000355480 ALG13Q9NP73 1137 aaKnown RBP18.96■□□□□ 0.63
COL18A1-202ENST00000355480 FAM49BQ9NUQ9 324 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 EHD2Q9NZN4 543 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 SH3BP1Q9Y3L3 701 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 SV2CQ496J9 727 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 AP1ARQ63HQ0 302 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 EFCAB12Q6NXP0 572 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 DCP1BQ8IZD4 617 aaKnown RBP18.96■□□□□ 0.63
COL18A1-202ENST00000355480 LRRC71Q8N4P6 559 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 MYOZ2Q9NPC6 264 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 UVRAGQ9P2Y5 699 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 IL18RAPO95256 599 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 CETPP11597 493 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 MEI1Q5TIA1 1274 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 ARL8AQ96BM9 186 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 YIPF2Q9BWQ6 316 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 UNC45AQ9H3U1 944 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 NDE1Q9NXR1 346 aa18.96■□□□□ 0.63
COL18A1-202ENST00000355480 TET3O43151 1660 aa18.96■□□□□ 0.62
COL18A1-202ENST00000355480 GTPBP10A4D1E9 387 aaKnown RBP18.95■□□□□ 0.62
COL18A1-202ENST00000355480 PATL1Q86TB9 770 aaKnown RBP18.95■□□□□ 0.62
COL18A1-202ENST00000355480 OR9Q1Q8NGQ5 310 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 C7orf25Q9BPX7 421 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 TMEM39BQ9GZU3 492 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 DOLKQ9UPQ8 538 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 SLC30A1Q9Y6M5 507 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 PDHBP11177 359 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 ARL4DP49703 201 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 TMEM117Q9H0C3 514 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 SPDYE5A6NIY4 337 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 GRAP2O75791 330 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 TMED1Q13445 227 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 ARHGEF7Q14155 803 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 SPDYE7PQ495Y7 208 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 IGDCC4Q8TDY8 1250 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 PPP1R36Q96LQ0 422 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 ERAP1Q9NZ08 941 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 ADAM21Q9UKJ8 722 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 STAT4Q14765 748 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 NT5C1AQ9BXI3 368 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.95■□□□□ 0.62
COL18A1-202ENST00000355480 ADCY10Q96PN6 1610 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 CCDC22O60826 627 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 DGKDQ16760 1214 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 P3H1Q32P28 736 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 ATP6V1G3Q96LB4 118 aa18.95■□□□□ 0.62
COL18A1-202ENST00000355480 SPATS2LQ9NUQ6 558 aaKnown RBP18.95■□□□□ 0.62
COL18A1-202ENST00000355480 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.95■□□□□ 0.624e-7■■■■□ 21.4
COL18A1-202ENST00000355480 GOLGA8RI6L899 631 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 NDUFS3O75489 264 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 HLA-DPA1P20036 260 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 WASHC5Q12768 1159 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 MXRA8Q9BRK3 442 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 RAB6BQ9NRW1 208 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 AP2B1P63010 937 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 OCA2Q04671 838 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 SPDYAQ5MJ70 313 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 LATS2Q9NRM7 1088 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 ARHGEF38Q9NXL2 777 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 RASA1P20936 1047 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 PCSK1P29120 753 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 CUL3Q13618 768 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 SLC18A3Q16572 532 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 GNASQ5JWF2 1037 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 RPAINQ86UA6 219 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 SCFD2Q8WU76 684 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms