RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 ARHGEF2Q92974 986 aaKnown RBP20.85■□□□□ 0.93
COL13A1-201ENST00000354547 SCLT1Q96NL6 688 aa20.85■□□□□ 0.93
COL13A1-201ENST00000354547 CYP26B1Q9NR63 512 aa20.85■□□□□ 0.93
COL13A1-201ENST00000354547 KLC4Q9NSK0 619 aa20.85■□□□□ 0.93
COL13A1-201ENST00000354547 PI4K2BG5E9Z4 385 aa20.85■□□□□ 0.93
COL13A1-201ENST00000354547 BRDTQ58F21 947 aaPredicted RBP20.85■□□□□ 0.93
COL13A1-201ENST00000354547 HP1BP3Q5SSJ5 553 aaPredicted RBP20.85■□□□□ 0.93
COL13A1-201ENST00000354547 CIAPIN1Q6FI81 312 aa20.85■□□□□ 0.93
COL13A1-201ENST00000354547 JPH1Q9HDC5 661 aaPredicted RBP20.85■□□□□ 0.93
COL13A1-201ENST00000354547 GGA2Q9UJY4 613 aa20.85■□□□□ 0.93
COL13A1-201ENST00000354547 ZNFX1Q9P2E3 1918 aaKnown RBP20.85■□□□□ 0.93
COL13A1-201ENST00000354547 PEX10O60683 326 aa20.84■□□□□ 0.93
COL13A1-201ENST00000354547 PSAPP07602 524 aa20.84■□□□□ 0.93
COL13A1-201ENST00000354547 POLGP54098 1239 aaPredicted RBP20.84■□□□□ 0.93
COL13A1-201ENST00000354547 ACTR2P61160 394 aa20.84■□□□□ 0.93
COL13A1-201ENST00000354547 ATP13A4Q4VNC1 1196 aa20.84■□□□□ 0.93
COL13A1-201ENST00000354547 ANAPC5Q9UJX4 755 aa20.84■□□□□ 0.93
COL13A1-201ENST00000354547 THAP12O43422 761 aa20.84■□□□□ 0.93
COL13A1-201ENST00000354547 ATF2P15336 505 aa20.84■□□□□ 0.93
COL13A1-201ENST00000354547 TAS2R40P59535 323 aa20.84■□□□□ 0.93
COL13A1-201ENST00000354547 FAM133BQ5BKY9 247 aaKnown RBP20.84■□□□□ 0.93
COL13A1-201ENST00000354547 GSTA5Q7RTV2 222 aa20.84■□□□□ 0.93
COL13A1-201ENST00000354547 DHX37Q8IY37 1157 aaKnown RBP20.84■□□□□ 0.93
COL13A1-201ENST00000354547 C3orf20Q8ND61 904 aa20.84■□□□□ 0.93
COL13A1-201ENST00000354547 SPIRE2Q8WWL2 714 aa20.84■□□□□ 0.93
COL13A1-201ENST00000354547 NTPCRQ9BSD7 190 aaKnown RBP20.84■□□□□ 0.93
COL13A1-201ENST00000354547 ATP6V0A4Q9HBG4 840 aa20.84■□□□□ 0.93
COL13A1-201ENST00000354547 SAMD15Q9P1V8 674 aa20.84■□□□□ 0.93
COL13A1-201ENST00000354547 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.84■□□□□ 0.93
COL13A1-201ENST00000354547 PCDHB2Q9Y5E7 798 aa20.84■□□□□ 0.93
COL13A1-201ENST00000354547 UMODL1Q5DID0 1318 aa20.83■□□□□ 0.93
COL13A1-201ENST00000354547 DGAT1O75907 488 aa20.83■□□□□ 0.93
COL13A1-201ENST00000354547 KCNA2P16389 499 aa20.83■□□□□ 0.93
COL13A1-201ENST00000354547 DSG3P32926 999 aa20.83■□□□□ 0.93
COL13A1-201ENST00000354547 GCNT1Q02742 428 aa20.83■□□□□ 0.93
COL13A1-201ENST00000354547 SNF8Q96H20 258 aa20.83■□□□□ 0.93
COL13A1-201ENST00000354547 C9orf72Q96LT7 481 aa20.83■□□□□ 0.93
COL13A1-201ENST00000354547 RUNDC3BQ96NL0 473 aa20.83■□□□□ 0.93
COL13A1-201ENST00000354547 ADAM22Q9P0K1 906 aa20.83■□□□□ 0.93
COL13A1-201ENST00000354547 SLC9A2Q9UBY0 812 aa20.83■□□□□ 0.93
COL13A1-201ENST00000354547 AGO2Q9UKV8 859 aaKnown RBP20.83■□□□□ 0.93
COL13A1-201ENST00000354547 MAP3K10Q02779 954 aa20.83■□□□□ 0.93
COL13A1-201ENST00000354547 SUGP1Q8IWZ8 645 aaKnown RBP20.83■□□□□ 0.93
COL13A1-201ENST00000354547 ZNF526Q8TF50 670 aaPredicted RBP20.83■□□□□ 0.93
COL13A1-201ENST00000354547 DCLK3Q9C098 648 aa20.83■□□□□ 0.93
COL13A1-201ENST00000354547 PPP1R1BQ9UD71 204 aaPredicted RBP20.83■□□□□ 0.93
COL13A1-201ENST00000354547 DOCK5Q9H7D0 1870 aa20.83■□□□□ 0.92
COL13A1-201ENST00000354547 GSTTP1A0A1W2PQM5 241 aa20.83■□□□□ 0.92
COL13A1-201ENST00000354547 STBD1O95210 358 aa20.83■□□□□ 0.92
COL13A1-201ENST00000354547 GAS8O95995 478 aa20.83■□□□□ 0.92
COL13A1-201ENST00000354547 KCNA3P22001 575 aa20.83■□□□□ 0.92
COL13A1-201ENST00000354547 STRN3Q13033 797 aa20.83■□□□□ 0.92
COL13A1-201ENST00000354547 CNGA2Q16280 664 aa20.83■□□□□ 0.92
COL13A1-201ENST00000354547 ZNF394Q53GI3 561 aa20.83■□□□□ 0.92
COL13A1-201ENST00000354547 TAOK1Q7L7X3 1001 aa20.83■□□□□ 0.92
COL13A1-201ENST00000354547 ARMC9Q7Z3E5 817 aa20.83■□□□□ 0.92
COL13A1-201ENST00000354547 SAMD3Q8N6K7 520 aa20.83■□□□□ 0.92
COL13A1-201ENST00000354547 ANKS4BQ8N8V4 417 aa20.83■□□□□ 0.92
COL13A1-201ENST00000354547 CCT6BQ92526 530 aa20.83■□□□□ 0.92
COL13A1-201ENST00000354547 CENPTQ96BT3 561 aa20.83■□□□□ 0.92
COL13A1-201ENST00000354547 ACSF2Q96CM8 615 aaPredicted RBP20.83■□□□□ 0.92
COL13A1-201ENST00000354547 FAM212AQ96EL1 285 aa20.83■□□□□ 0.92
COL13A1-201ENST00000354547 TARS2Q9BW92 718 aaKnown RBP20.83■□□□□ 0.92
COL13A1-201ENST00000354547 TMEM120BA0PK00 339 aa20.82■□□□□ 0.92
COL13A1-201ENST00000354547 ZKSCAN8Q15776 578 aaPredicted RBP20.82■□□□□ 0.92
COL13A1-201ENST00000354547 ANKS1BQ7Z6G8 1248 aa20.82■□□□□ 0.92
COL13A1-201ENST00000354547 C12orf50Q8NA57 414 aaPredicted RBP20.82■□□□□ 0.92
COL13A1-201ENST00000354547 MTMR14Q8NCE2 650 aa20.82■□□□□ 0.92
COL13A1-201ENST00000354547 MCPH1Q8NEM0 835 aa20.82■□□□□ 0.92
COL13A1-201ENST00000354547 JDP2Q8WYK2 163 aa20.82■□□□□ 0.92
COL13A1-201ENST00000354547 DDX27Q96GQ7 796 aaKnown RBP20.82■□□□□ 0.92
COL13A1-201ENST00000354547 HAPLN2Q9GZV7 340 aa20.82■□□□□ 0.92
COL13A1-201ENST00000354547 APOBEC3GQ9HC16 384 aaKnown RBP20.82■□□□□ 0.92
COL13A1-201ENST00000354547 GJA3Q9Y6H8 435 aa20.82■□□□□ 0.92
COL13A1-201ENST00000354547 KRT10P13645 584 aa20.82■□□□□ 0.92
COL13A1-201ENST00000354547 GNA15P30679 374 aa20.82■□□□□ 0.92
COL13A1-201ENST00000354547 PRKG1Q13976 671 aa20.82■□□□□ 0.92
COL13A1-201ENST00000354547 CYP4F22Q6NT55 531 aa20.82■□□□□ 0.92
COL13A1-201ENST00000354547 CAPN12Q6ZSI9 719 aa20.82■□□□□ 0.92
COL13A1-201ENST00000354547 ZNF365Q70YC5 407 aa20.82■□□□□ 0.92
COL13A1-201ENST00000354547 NSUN6Q8TEA1 469 aaKnown RBP20.82■□□□□ 0.92
COL13A1-201ENST00000354547 PCNTO95613 3336 aa20.82■□□□□ 0.92
COL13A1-201ENST00000354547 EXTL3O43909 919 aa20.81■□□□□ 0.92
COL13A1-201ENST00000354547 GTF2H1P32780 548 aa20.81■□□□□ 0.92
COL13A1-201ENST00000354547 MRRFQ96E11 262 aaKnown RBP20.81■□□□□ 0.92
COL13A1-201ENST00000354547 ZBED3Q96IU2 234 aaPredicted RBP20.81■□□□□ 0.92
COL13A1-201ENST00000354547 STMN4Q9H169 189 aaPredicted RBP20.81■□□□□ 0.92
COL13A1-201ENST00000354547 ACTR5Q9H9F9 607 aaPredicted RBP20.81■□□□□ 0.92
COL13A1-201ENST00000354547 RBAKQ9NYW8 714 aaPredicted RBP20.81■□□□□ 0.92
COL13A1-201ENST00000354547 WHRNQ9P202 907 aa20.81■□□□□ 0.92
COL13A1-201ENST00000354547 ZNF541Q9H0D2 1346 aa20.81■□□□□ 0.92
COL13A1-201ENST00000354547 CCT8L1PA6NM43 557 aa20.81■□□□□ 0.92
COL13A1-201ENST00000354547 TCP11X1B4DZS4 312 aa20.81■□□□□ 0.92
COL13A1-201ENST00000354547 VNN1O95497 513 aa20.81■□□□□ 0.92
COL13A1-201ENST00000354547 GH1P01241 217 aa20.81■□□□□ 0.92
COL13A1-201ENST00000354547 TCF4P15884 667 aa20.81■□□□□ 0.92
COL13A1-201ENST00000354547 ITIH2P19823 946 aa20.81■□□□□ 0.92
COL13A1-201ENST00000354547 GARTP22102 1010 aa20.81■□□□□ 0.92
COL13A1-201ENST00000354547 IVDP26440 423 aa20.81■□□□□ 0.92
COL13A1-201ENST00000354547 SP2Q02086 613 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms