RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 hCG_1984214I3L0E3 225 aa16.08■□□□□ 0.17
PTBP1-201ENST00000349038 TRPA1O75762 1119 aa16.08■□□□□ 0.17
PTBP1-201ENST00000349038 TTLL1O95922 423 aa16.08■□□□□ 0.17
PTBP1-201ENST00000349038 ZSCAN5DPP0CG00 497 aa16.08■□□□□ 0.17
PTBP1-201ENST00000349038 DESP17661 470 aa16.08■□□□□ 0.17
PTBP1-201ENST00000349038 PPP4CP60510 307 aa16.08■□□□□ 0.17
PTBP1-201ENST00000349038 C1orf146Q5VVC0 180 aa16.08■□□□□ 0.17
PTBP1-201ENST00000349038 RNF43Q68DV7 783 aa16.08■□□□□ 0.17
PTBP1-201ENST00000349038 RASSF3Q86WH2 238 aa16.08■□□□□ 0.17
PTBP1-201ENST00000349038 ZNF713Q8N859 430 aaPredicted RBP16.08■□□□□ 0.17
PTBP1-201ENST00000349038 SYT2Q8N9I0 419 aaPredicted RBP16.08■□□□□ 0.17
PTBP1-201ENST00000349038 NEDD1Q8NHV4 660 aa16.08■□□□□ 0.17
PTBP1-201ENST00000349038 FAM84AQ96KN4 292 aa16.08■□□□□ 0.17
PTBP1-201ENST00000349038 GPR101Q96P66 508 aaPredicted RBP16.08■□□□□ 0.17
PTBP1-201ENST00000349038 DNAJC18Q9H819 358 aa16.08■□□□□ 0.17
PTBP1-201ENST00000349038 ZNF232Q9UNY5 417 aa16.08■□□□□ 0.17
PTBP1-201ENST00000349038 SOX5P35711 763 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 FASTKD3Q14CZ7 662 aaKnown RBP16.08■□□□□ 0.16
PTBP1-201ENST00000349038 KCTD21Q4G0X4 260 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 RGS9BPQ6ZS82 235 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 SH3TC2Q8TF17 1288 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 BHMT2Q9H2M3 363 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 RMI1Q9H9A7 625 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 CYP4F11Q9HBI6 524 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 CNOT7Q9UIV1 285 aaKnown RBP16.08■□□□□ 0.16
PTBP1-201ENST00000349038 GRID1Q9ULK0 1009 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 ATP8B3O60423 1300 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 TBCAO75347 108 aaKnown RBP16.08■□□□□ 0.16
PTBP1-201ENST00000349038 KRT4P19013 534 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 HYIQ5T013 277 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 LPCAT4Q643R3 524 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 RINLQ6ZS11 566 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 ILDR2Q71H61 639 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 SLFN11Q7Z7L1 901 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 SLC51AQ86UW1 340 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 FAM186BQ8IYM0 893 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 MYCT1Q8N699 235 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 CLMNQ96JQ2 1002 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 SERPINB12Q96P63 405 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 EYA3Q99504 573 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 RUSC1Q9BVN2 902 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 DMAP1Q9NPF5 467 aaPredicted RBP16.08■□□□□ 0.16
PTBP1-201ENST00000349038 AAASQ9NRG9 546 aa16.08■□□□□ 0.16
PTBP1-201ENST00000349038 SYNGAP1Q96PV0 1343 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 LMNB1P20700 586 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 NOVP48745 357 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 ADCY7P51828 1080 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 HIRAP54198 1017 aaPredicted RBP16.07■□□□□ 0.16
PTBP1-201ENST00000349038 PRR16Q569H4 304 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 PLEKHG4Q58EX7 1191 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 SLC13A5Q86YT5 568 aaPredicted RBP16.07■□□□□ 0.16
PTBP1-201ENST00000349038 MAP7D3Q8IWC1 876 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 FBXO27Q8NI29 283 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 ZNF653Q96CK0 615 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 AGBL1Q96MI9 1066 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 RBM15Q96T37 977 aaKnown RBP eCLIP16.07■□□□□ 0.164e-7■■■□□ 14.9
PTBP1-201ENST00000349038 CDH16O75309 829 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 LDHBP07195 334 aaKnown RBP16.07■□□□□ 0.16
PTBP1-201ENST00000349038 SLURP2P0DP57 97 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 TROVE2P10155 538 aaKnown RBP eCLIP16.07■□□□□ 0.162e-6■■□□□ 11.7
PTBP1-201ENST00000349038 CDK8P49336 464 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 PDE1CQ14123 709 aaPredicted RBP16.07■□□□□ 0.16
PTBP1-201ENST00000349038 GRAMD1BQ3KR37 738 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 PHLDB3Q6NSJ2 640 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 C16orf86Q6ZW13 317 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 CLNKQ7Z7G1 428 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 PPM1KQ8N3J5 372 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 SHKBP1Q8TBC3 707 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 CENPKQ9BS16 269 aa16.07■□□□□ 0.16
PTBP1-201ENST00000349038 DHX36Q9H2U1 1008 aaKnown RBP16.07■□□□□ 0.16
PTBP1-201ENST00000349038 ZBTB39O15060 712 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 ZSCAN9O15535 394 aaPredicted RBP16.06■□□□□ 0.16
PTBP1-201ENST00000349038 RRM1P23921 792 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 PICALMQ13492 652 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 MAP7Q14244 749 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 WDR72Q3MJ13 1102 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 CBWD6Q4V339 395 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 CBWD3Q5JTY5 395 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 CBWD5Q5RIA9 395 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 BTNL9Q6UXG8 535 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 HAS1Q92839 578 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 RILPQ96NA2 401 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 ZSWIM1Q9BR11 485 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 SPATA16Q9BXB7 569 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 EBF3Q9H4W6 596 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 C10orf88Q9H8K7 445 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 ZNF287Q9HBT7 754 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 USP21Q9UK80 565 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 AK5Q9Y6K8 562 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 DDX60LQ5H9U9 1706 aaKnown RBP16.06■□□□□ 0.16
PTBP1-201ENST00000349038 PI4K2BG5E9Z4 385 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 CYP11B2P19099 503 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 SERPINB6P35237 376 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 PSMC4P43686 418 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 IKQ13123 557 aaPredicted RBP16.06■□□□□ 0.16
PTBP1-201ENST00000349038 GIT2Q14161 759 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 KNOP1Q1ED39 458 aaKnown RBP16.06■□□□□ 0.16
PTBP1-201ENST00000349038 CROCCP2Q86T23 111 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 SLC26A7Q8TE54 656 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 FAM136AQ96C01 138 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms