RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 KHDRBS2Q5VWX1 349 aaKnown RBP24.28■■□□□ 1.48
NPAS3-201ENST00000346562 SNX31Q8N9S9 440 aa24.28■■□□□ 1.48
NPAS3-201ENST00000346562 ZNF512Q96ME7 567 aaPredicted RBP24.28■■□□□ 1.48
NPAS3-201ENST00000346562 CRAMP1Q96RY5 1269 aa24.28■■□□□ 1.48
NPAS3-201ENST00000346562 GRIN3BO60391 1043 aa24.28■■□□□ 1.48
NPAS3-201ENST00000346562 SLC25A27O95847 323 aa24.28■■□□□ 1.48
NPAS3-201ENST00000346562 HSPA9P38646 679 aaKnown RBP24.28■■□□□ 1.48
NPAS3-201ENST00000346562 EMC2Q15006 297 aa24.28■■□□□ 1.48
NPAS3-201ENST00000346562 UVRAGQ9P2Y5 699 aa24.28■■□□□ 1.48
NPAS3-201ENST00000346562 CNOT7Q9UIV1 285 aaKnown RBP24.28■■□□□ 1.48
NPAS3-201ENST00000346562 RARBP10826 455 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 CDH2P19022 906 aaPredicted RBP24.27■■□□□ 1.48
NPAS3-201ENST00000346562 KIZQ2M2Z5 673 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 ARL8AQ96BM9 186 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 ATP6V1G3Q96LB4 118 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 FAM32AQ9Y421 112 aaKnown RBP24.27■■□□□ 1.48
NPAS3-201ENST00000346562 C12orf60Q5U649 245 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 PTPRN2Q92932 1015 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 TMEM143Q96AN5 459 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 PJA2O43164 708 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 PSD3Q9NYI0 1048 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 CRB1P82279 1406 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 SERPINB9P50453 376 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 NFIXQ14938 502 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 SGMS1Q86VZ5 419 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 APEX2Q9UBZ4 518 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 PDGFRAP16234 1089 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 PIGHQ14442 188 aaPredicted RBP24.27■■□□□ 1.48
NPAS3-201ENST00000346562 ANKMY2Q8IV38 441 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 GSPT2Q8IYD1 628 aaKnown RBP24.27■■□□□ 1.48
NPAS3-201ENST00000346562 ARHGEF26Q96DR7 871 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 GJD4Q96KN9 370 aaPredicted RBP24.27■■□□□ 1.48
NPAS3-201ENST00000346562 GIMAP4Q9NUV9 329 aa24.27■■□□□ 1.48
NPAS3-201ENST00000346562 NPHP3-ACAD11A0A0J9YXS1 232 aa24.26■■□□□ 1.47
NPAS3-201ENST00000346562 DMC1Q14565 340 aa24.26■■□□□ 1.47
NPAS3-201ENST00000346562 RNPC3Q96LT9 517 aaKnown RBP24.26■■□□□ 1.47
NPAS3-201ENST00000346562 UPP2O95045 317 aa24.26■■□□□ 1.47
NPAS3-201ENST00000346562 ALDH8A1Q9H2A2 487 aaPredicted RBP24.26■■□□□ 1.47
NPAS3-201ENST00000346562 PKP3Q9Y446 797 aa24.26■■□□□ 1.47
NPAS3-201ENST00000346562 GLB1LQ6UWU2 654 aa24.26■■□□□ 1.47
NPAS3-201ENST00000346562 NLRP14Q86W24 1093 aa24.26■■□□□ 1.47
NPAS3-201ENST00000346562 AGR3Q8TD06 166 aa24.26■■□□□ 1.47
NPAS3-201ENST00000346562 CALML6Q8TD86 181 aa24.26■■□□□ 1.47
NPAS3-201ENST00000346562 TMEM161AQ9NX61 479 aa24.26■■□□□ 1.47
NPAS3-201ENST00000346562 TTC26A0AVF1 554 aa24.26■■□□□ 1.47
NPAS3-201ENST00000346562 TBX3O15119 743 aa24.26■■□□□ 1.47
NPAS3-201ENST00000346562 EN1Q05925 392 aaPredicted RBP24.26■■□□□ 1.47
NPAS3-201ENST00000346562 USP33Q8TEY7 942 aa24.26■■□□□ 1.47
NPAS3-201ENST00000346562 PCDHB7Q9Y5E2 793 aa24.26■■□□□ 1.47
NPAS3-201ENST00000346562 VGLL3A8MV65 326 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 CFAP99D6REC4 459 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 ENTPD3O75355 529 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 NCOA4Q13772 614 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 ARHGAP18Q8N392 663 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 STK33Q9BYT3 514 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 RGS7P49802 495 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 BAATQ14032 418 aaPredicted RBP24.25■■□□□ 1.47
NPAS3-201ENST00000346562 HIC1Q14526 733 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 STAG2Q8N3U4 1231 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 RFWD2Q8NHY2 731 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 ZNF507Q8TCN5 953 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 SCFD2Q8WU76 684 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 ZFP42Q96MM3 310 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 AURKCQ9UQB9 309 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 SNAP23O00161 211 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 PCSK1P29120 753 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 SLC7A14Q8TBB6 771 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 TBC1D16Q8TBP0 767 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 CAPZA2P47755 286 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 CCDC85BQ15834 202 aaPredicted RBP24.25■■□□□ 1.47
NPAS3-201ENST00000346562 PABPC5Q96DU9 382 aaKnown RBP24.25■■□□□ 1.47
NPAS3-201ENST00000346562 OLFM3Q96PB7 478 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 ZNF556Q9HAH1 456 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 ZC4H2Q9NQZ6 224 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 RGS4P49798 205 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 CPT1AP50416 773 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 TJAP1Q5JTD0 557 aa24.25■■□□□ 1.47
NPAS3-201ENST00000346562 DHX40Q8IX18 779 aaKnown RBP24.25■■□□□ 1.47
NPAS3-201ENST00000346562 SREBF2Q12772 1141 aa24.24■■□□□ 1.47
NPAS3-201ENST00000346562 MTFR1Q15390 333 aa24.24■■□□□ 1.47
NPAS3-201ENST00000346562 CD274Q9NZQ7 290 aa24.24■■□□□ 1.47
NPAS3-201ENST00000346562 SMG5Q9UPR3 1016 aaKnown RBP24.24■■□□□ 1.47
NPAS3-201ENST00000346562 MGAT5BQ3V5L5 792 aa24.24■■□□□ 1.47
NPAS3-201ENST00000346562 LATS2Q9NRM7 1088 aa24.24■■□□□ 1.47
NPAS3-201ENST00000346562 TRAF3IP3Q9Y228 551 aa24.24■■□□□ 1.47
NPAS3-201ENST00000346562 POLRMTO00411 1230 aaKnown RBP24.24■■□□□ 1.47
NPAS3-201ENST00000346562 NEK2P51955 445 aa24.24■■□□□ 1.47
NPAS3-201ENST00000346562 LRRC8BQ6P9F7 803 aa24.24■■□□□ 1.47
NPAS3-201ENST00000346562 KLHL11Q9NVR0 708 aa24.24■■□□□ 1.47
NPAS3-201ENST00000346562 SERPINB10P48595 397 aa24.24■■□□□ 1.47
NPAS3-201ENST00000346562 CFAP73A6NFT4 308 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 CETPP11597 493 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 HARS2P49590 506 aaKnown RBP24.23■■□□□ 1.47
NPAS3-201ENST00000346562 LRRC14Q15048 493 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 AGAP3Q96P47 875 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 TRABDQ9H4I3 376 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 FBXL5Q9UKA1 691 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 SUPT3HB4E1H0 165 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 ALDH1A3P47895 512 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 RBBP8NLQ8NC74 664 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms