RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 IQCA1LA6NCM1 817 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 ANXA13P27216 316 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 DSG1Q02413 1049 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 SLC29A2Q14542 456 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 CENPUQ71F23 418 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 AENQ8WTP8 325 aaKnown RBP16.34■□□□□ 0.21
SRPK1-201ENST00000346162 THTPAQ9BU02 230 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 RTFDC1Q9BY42 306 aaPredicted RBP16.34■□□□□ 0.21
SRPK1-201ENST00000346162 NGRNQ9NPE2 291 aaKnown RBP16.34■□□□□ 0.21
SRPK1-201ENST00000346162 APEX2Q9UBZ4 518 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 ZNRF3Q9ULT6 936 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 SPATA31A6Q5VVP1 1343 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 TRAPPC3O43617 180 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 ART3Q13508 389 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 KIAA1755Q5JYT7 1200 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 SNX30Q5VWJ9 437 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 TTI2Q6NXR4 508 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 CCNYQ8ND76 341 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 DDHD1Q8NEL9 900 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 FAM151AQ8WW52 585 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 LACRTQ9GZZ8 138 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 IL1RAPL1Q9NZN1 696 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 IQANK1A0A1B0GTG1 560 aa16.33■□□□□ 0.21
SRPK1-201ENST00000346162 GFAPP14136 432 aa16.33■□□□□ 0.21
SRPK1-201ENST00000346162 ZC2HC1CQ53FD0 456 aaPredicted RBP16.33■□□□□ 0.21
SRPK1-201ENST00000346162 TTMPQ5BVD1 217 aa16.33■□□□□ 0.21
SRPK1-201ENST00000346162 CDKAL1Q5VV42 579 aa16.33■□□□□ 0.21
SRPK1-201ENST00000346162 RSBN1LQ6PCB5 846 aaPredicted RBP16.33■□□□□ 0.21
SRPK1-201ENST00000346162 CYFIP1Q7L576 1253 aa16.33■□□□□ 0.21
SRPK1-201ENST00000346162 ENOSF1Q7L5Y1 443 aa16.33■□□□□ 0.21
SRPK1-201ENST00000346162 CATSPER3Q86XQ3 398 aa16.33■□□□□ 0.21
SRPK1-201ENST00000346162 PYROXD1Q8WU10 500 aa16.33■□□□□ 0.21
SRPK1-201ENST00000346162 RNF25Q96BH1 459 aaPredicted RBP16.33■□□□□ 0.21
SRPK1-201ENST00000346162 FAM192AQ9GZU8 254 aa16.33■□□□□ 0.21
SRPK1-201ENST00000346162 ARL4AP40617 200 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 NFIAQ12857 509 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 KBTBD12Q3ZCT8 623 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 TSEN2Q8NCE0 465 aaKnown RBP16.33■□□□□ 0.2
SRPK1-201ENST00000346162 SLC38A10Q9HBR0 1119 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 COL5A2P05997 1499 aaPredicted RBP16.33■□□□□ 0.2
SRPK1-201ENST00000346162 CYP26A1O43174 497 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 ESRRBO95718 433 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 ZNF18P17022 549 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 CCDC15Q0P6D6 951 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 ZNF699Q32M78 642 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 GPD1LQ8N335 351 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 TTC25Q96NG3 672 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 EIF2AQ9BY44 585 aaKnown RBP16.33■□□□□ 0.2
SRPK1-201ENST00000346162 METTL5Q9NRN9 209 aaKnown RBP16.33■□□□□ 0.2
SRPK1-201ENST00000346162 DDX18Q9NVP1 670 aaKnown RBP16.33■□□□□ 0.2
SRPK1-201ENST00000346162 ZNF70Q9UC06 446 aaPredicted RBP16.33■□□□□ 0.2
SRPK1-201ENST00000346162 ITGB1BP2Q9UKP3 347 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 CALB2P22676 271 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 TBXAS1P24557 533 aaPredicted RBP16.33■□□□□ 0.2
SRPK1-201ENST00000346162 ZNF568Q3ZCX4 644 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 USP38Q8NB14 1042 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 LPAR1Q92633 364 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 WNT8AQ9H1J5 351 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 HSPBP1Q9NZL4 362 aa16.33■□□□□ 0.2
SRPK1-201ENST00000346162 ENO1P06733 434 aaKnown RBP16.32■□□□□ 0.2
SRPK1-201ENST00000346162 GLI1P08151 1106 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 HMGCS2P54868 508 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 COL9A3Q14050 684 aaPredicted RBP16.32■□□□□ 0.2
SRPK1-201ENST00000346162 Q3C1V9 767 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 KCTD21Q4G0X4 260 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 CCDC137Q6PK04 289 aaKnown RBP16.32■□□□□ 0.2
SRPK1-201ENST00000346162 CNGB3Q9NQW8 809 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 AGO2Q9UKV8 859 aaKnown RBP16.32■□□□□ 0.2
SRPK1-201ENST00000346162 APOBEC2Q9Y235 224 aaKnown RBP16.32■□□□□ 0.2
SRPK1-201ENST00000346162 B2RBV5 119 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 WDR46O15213 610 aaKnown RBP16.32■□□□□ 0.2
SRPK1-201ENST00000346162 ATP6V1G1O75348 118 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 ZBTB7AO95365 584 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 CALB1P05937 261 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 KITP10721 976 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 GYS1P13807 737 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 GNA15P30679 374 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 NAB2Q15742 525 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 TRIM59Q8IWR1 403 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 RBAKQ9NYW8 714 aaPredicted RBP16.32■□□□□ 0.2
SRPK1-201ENST00000346162 KCND2Q9NZV8 630 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 TNS2Q63HR2 1409 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 CYP11B2P19099 503 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 SAT1P21673 171 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 USP4Q13107 963 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 CDO1Q16878 200 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 TRMT10CQ7L0Y3 403 aaKnown RBP16.32■□□□□ 0.2
SRPK1-201ENST00000346162 SDCCAG3Q96C92 435 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 LRRC4Q9HBW1 653 aa16.32■□□□□ 0.2
SRPK1-201ENST00000346162 ASAP2O43150 1006 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 KLRC1P26715 233 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 TSPY1Q01534 308 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 MTMR2Q13614 643 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 BAATQ14032 418 aaPredicted RBP16.31■□□□□ 0.2
SRPK1-201ENST00000346162 STK32AQ8WU08 396 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 NDNQ99608 321 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 C10orf88Q9H8K7 445 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 SENP1Q9P0U3 644 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 SLC9A2Q9UBY0 812 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 CDH16O75309 829 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms