RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 BACE2Q9Y5Z0 518 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 FAM13AO94988 1023 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 KRT18P05783 430 aaKnown RBP12.99□□□□□ -0.33
TUBD1-203ENST00000346141 HOXA9P31269 272 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 GBP2P32456 591 aaPredicted RBP12.99□□□□□ -0.33
TUBD1-203ENST00000346141 RPL9P32969 192 aaKnown RBP12.99□□□□□ -0.33
TUBD1-203ENST00000346141 ABCD1P33897 745 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 GRIN1Q05586 938 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 TDGQ13569 410 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 RAB33AQ14088 237 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 KARSQ15046 597 aaKnown RBP12.99□□□□□ -0.33
TUBD1-203ENST00000346141 KYAT1Q16773 422 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 CD300LGQ6UXG3 332 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 RTL10Q7L3V2 364 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 SPRYD3Q8NCJ5 442 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 C3orf58Q8NDZ4 430 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 LARP4BQ92615 738 aaKnown RBP12.99□□□□□ -0.33
TUBD1-203ENST00000346141 BICD1Q96G01 975 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 ZBTB45Q96K62 511 aaPredicted RBP12.99□□□□□ -0.33
TUBD1-203ENST00000346141 ZMAT2Q96NC0 199 aaKnown RBP12.99□□□□□ -0.33
TUBD1-203ENST00000346141 CCSER1Q9C0I3 900 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 PLEKHA5Q9HAU0 1116 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 KCNK12Q9HB15 430 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 MYH11P35749 1972 aa12.99□□□□□ -0.33
TUBD1-203ENST00000346141 MTCL1Q9Y4B5 1905 aaKnown RBP12.99□□□□□ -0.33
TUBD1-203ENST00000346141 K7ENM7 598 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 HNRNPDLO14979 420 aaKnown RBP12.98□□□□□ -0.33
TUBD1-203ENST00000346141 SYN3O14994 580 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 N4BP1O75113 896 aaKnown RBP12.98□□□□□ -0.33
TUBD1-203ENST00000346141 XYLBO75191 536 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 TBCAO75347 108 aaKnown RBP12.98□□□□□ -0.33
TUBD1-203ENST00000346141 C8AP07357 584 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 POU2F2P09086 479 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 CLTAP09496 248 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 SYT1P21579 422 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 TKTP29401 623 aaKnown RBP12.98□□□□□ -0.33
TUBD1-203ENST00000346141 OR1D2P34982 312 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 MATR3P43243 847 aaKnown RBP eCLIP12.98□□□□□ -0.33
TUBD1-203ENST00000346141 LIG4P49917 911 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 NHLH1Q02575 133 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 DHX8Q14562 1220 aaKnown RBP12.98□□□□□ -0.33
TUBD1-203ENST00000346141 MCM6Q14566 821 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 PTPAQ15257 358 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 UVSSAQ2YD98 709 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 SLC10A6Q3KNW5 377 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 PPM1LQ5SGD2 360 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 MYCT1Q8N699 235 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 LRRC15Q8TF66 581 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 NXPE3Q969Y0 559 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 TBX20Q9UMR3 447 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 NUB1Q9Y5A7 615 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 CDY1Q9Y6F8 540 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 TRIP11Q15643 1979 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 VWA8A3KMH1 1905 aa12.98□□□□□ -0.33
TUBD1-203ENST00000346141 MEFVO15553 781 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-203ENST00000346141 ADAM12O43184 909 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 TRAK2O60296 914 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 PIGRP01833 764 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 IGFBP6P24592 240 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-203ENST00000346141 AVPR2P30518 371 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 DDIT3P35638 169 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 BRCC3P46736 316 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 PTPN5P54829 565 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 RESTQ13127 1097 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 C18orf25Q96B23 403 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-203ENST00000346141 MYADMQ96S97 322 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 SMOC2Q9H3U7 446 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 STK17AQ9UEE5 414 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 CCDC39Q9UFE4 941 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 DUSP12Q9UNI6 340 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 SRPRBQ9Y5M8 271 aaKnown RBP12.97□□□□□ -0.33
TUBD1-203ENST00000346141 CLIC4Q9Y696 253 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 ZFP37Q9Y6Q3 630 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-203ENST00000346141 CITO14578 2027 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 H7C4K7 107 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 I3L4J1 428 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 K7ELQ4 463 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-203ENST00000346141 PDGFBP01127 241 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-203ENST00000346141 CXCL8P10145 99 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 LAMP2P13473 410 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 MARCKSP29966 332 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-203ENST00000346141 TXLNAP40222 546 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 VCPP55072 806 aaKnown RBP12.97□□□□□ -0.33
TUBD1-203ENST00000346141 SEZ6Q53EL9 994 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 AXDND1Q5T1B0 1012 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-203ENST00000346141 SLC8B1Q6J4K2 584 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 GET4Q7L5D6 327 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-203ENST00000346141 KRI1Q8N9T8 703 aaKnown RBP12.97□□□□□ -0.33
TUBD1-203ENST00000346141 PRSS33Q8NF86 280 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 SLC7A14Q8TBB6 771 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 EPSTI1Q96J88 318 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 TSPAN18Q96SJ8 248 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 ZHX3Q9H4I2 956 aa12.97□□□□□ -0.33
TUBD1-203ENST00000346141 FBXO2Q9UK22 296 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-203ENST00000346141 MORC2Q9Y6X9 1032 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-203ENST00000346141 TTC26A0AVF1 554 aa12.96□□□□□ -0.34
TUBD1-203ENST00000346141 CYP3A5P20815 502 aa12.96□□□□□ -0.34
TUBD1-203ENST00000346141 FSHRP23945 695 aa12.96□□□□□ -0.34
TUBD1-203ENST00000346141 PPP2R3AQ06190 1150 aa12.96□□□□□ -0.34
TUBD1-203ENST00000346141 VARS2Q5ST30 1063 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms