RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ZNF500O60304 480 aaPredicted RBP17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 RTN2O75298 545 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 CKMP06732 381 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 CTXN3Q4LDR2 81 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 RHOT1Q8IXI2 618 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 BRI3BPQ8WY22 251 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 HPDLQ96IR7 371 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 SUDS3Q9H7L9 328 aaPredicted RBP17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 RNF40O75150 1001 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 MED24O75448 989 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 DR1Q01658 176 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 GFPT1Q06210 699 aaPredicted RBP17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 B4GALNT4Q76KP1 1039 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 VSIG10LQ86VR7 867 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 MTMR14Q8NCE2 650 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 FSD1LQ9BXM9 530 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 HIPK3Q9H422 1215 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 DPP7Q9UHL4 492 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 PYCARDQ9ULZ3 195 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 SNCAIPQ9Y6H5 919 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 EVX2Q03828 476 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 RBBP8NLQ8NC74 664 aaPredicted RBP17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 NUDCD1Q96RS6 583 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 PCSK1NQ9UHG2 260 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 TLK1Q9UKI8 766 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 GNL1P36915 607 aaPredicted RBP17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 PSMC6P62333 389 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 GRB10Q13322 594 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 ITPRIPL1Q6GPH6 555 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 PCGF5Q86SE9 256 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 ARHGAP18Q8N392 663 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 RABGGTAQ92696 567 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 RUSC1Q9BVN2 902 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 MAGEB5Q9BZ81 275 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 LTBP3Q9NS15 1303 aa17.37■□□□□ 0.37
SMARCA4-201ENST00000344626 GOLGA8KD6RF30 607 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 BUB1BO60566 1050 aaPredicted RBP17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 ITGB3P05106 788 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 SERPINB6P35237 376 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 MSH2P43246 934 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 HSD17B4P51659 736 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 LBX2Q6XYB7 198 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 FAF2Q96CS3 445 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 DPP3Q9NY33 737 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 PALMO75781 387 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 PLTPP55058 493 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 TATDN1Q6P1N9 297 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 CAPN11Q9UMQ6 739 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 PODXLO00592 558 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 NOP14P78316 857 aaKnown RBP17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 ATP11AP98196 1134 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 LAMTOR4Q0VGL1 99 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 ANKRD20A3Q5VUR7 823 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 AGXT2Q9BYV1 514 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 WNT8AQ9H1J5 351 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 KANSL3Q9P2N6 904 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 TRPV2Q9Y5S1 764 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 POC1B-GALNT4F8VUJ3 575 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 KRT3P12035 628 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 CXCR5P32302 372 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 PRMT2P55345 433 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 CENPUQ71F23 418 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 SDCCAG8Q86SQ7 713 aaPredicted RBP17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 DHX35Q9H5Z1 703 aaKnown RBP17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 SLC4A7Q9Y6M7 1214 aa17.36■□□□□ 0.37
SMARCA4-201ENST00000344626 MROH7Q68CQ1 1323 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 FGGP02679 453 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 GARTP22102 1010 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 MRPS31Q92665 395 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 RILPQ96NA2 401 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 NAGPAQ9UK23 515 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 TTC26A0AVF1 554 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 WEE2P0C1S8 567 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 SLC1A1P43005 524 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 SULT1E1P49888 294 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 KRT33BQ14525 404 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 CDKL3Q8IVW4 592 aaPredicted RBP17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 PLEKHA5Q9HAU0 1116 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 EPB41L5Q9HCM4 733 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 PDGFCQ9NRA1 345 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 HEY1Q9Y5J3 304 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 TOM1L1O75674 476 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 LBX1P52954 281 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 DHX40Q8IX18 779 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 DSEQ9UL01 958 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 ITGA7Q13683 1181 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 CTU1Q7Z7A3 348 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 EFHBQ8N7U6 833 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 GDAP1L1Q96MZ0 367 aa17.35■□□□□ 0.37
SMARCA4-201ENST00000344626 NDUFAB1O14561 156 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 TLL1O43897 1013 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 NPTX2P47972 431 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 CELF3Q5SZQ8 465 aaKnown RBP17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 RFFLQ8WZ73 363 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 ELAVL2Q12926 359 aaKnown RBP17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 NTRK3Q16288 839 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 CYP4F11Q9HBI6 524 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 AGPAT3Q9NRZ7 376 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 FAM86B1E9PN63 330 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 FAM86B2P0C5J1 330 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms