RNA–Protein interactions for RNA: ENST00000344523.8

NR6A1-201, Transcript of nuclear receptor subfamily 6 group A member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NR6A1, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR6A1-201ENST00000344523 TRAPPC11Q7Z392 1133 aa25.32■■□□□ 1.64
NR6A1-201ENST00000344523 C1orf127Q8N9H9 656 aa25.32■■□□□ 1.64
NR6A1-201ENST00000344523 CACTINQ8WUQ7 758 aaKnown RBP25.32■■□□□ 1.64
NR6A1-201ENST00000344523 PAAF1Q9BRP4 392 aa25.32■■□□□ 1.64
NR6A1-201ENST00000344523 DNAJB4Q9UDY4 337 aa25.32■■□□□ 1.64
NR6A1-201ENST00000344523 UBQLN1Q9UMX0 589 aaKnown RBP25.32■■□□□ 1.64
NR6A1-201ENST00000344523 DERAQ9Y315 318 aa25.32■■□□□ 1.64
NR6A1-201ENST00000344523 LRRC10BA6NIK2 292 aa25.31■■□□□ 1.64
NR6A1-201ENST00000344523 IGFBP6P24592 240 aaPredicted RBP25.31■■□□□ 1.64
NR6A1-201ENST00000344523 CHRDL2Q6WN34 429 aa25.31■■□□□ 1.64
NR6A1-201ENST00000344523 BEST2Q8NFU1 509 aa25.31■■□□□ 1.64
NR6A1-201ENST00000344523 RC3H2Q9HBD1 1191 aaKnown RBP25.31■■□□□ 1.64
NR6A1-201ENST00000344523 KANSL3Q9P2N6 904 aa25.31■■□□□ 1.64
NR6A1-201ENST00000344523 PPEF2O14830 753 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 PHACTR2O75167 634 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 CST3P01034 146 aaPredicted RBP25.3■■□□□ 1.64
NR6A1-201ENST00000344523 ITGB3P05106 788 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 KRT19P08727 400 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 BTG3Q14201 252 aaPredicted RBP25.3■■□□□ 1.64
NR6A1-201ENST00000344523 PHOSPHO2Q8TCD6 241 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 CRACR2AQ9BSW2 395 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 TMEM8AQ9HCN3 771 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 ANK1P16157 1881 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 TLL1O43897 1013 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 VNN1O95497 513 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 MYOGP15173 224 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 PBX3P40426 434 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 MXI1P50539 228 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 PTPRSQ13332 1948 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 ZACNQ401N2 412 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 KRT39Q6A163 491 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 TAS1R2Q8TE23 839 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 FAM193BQ96PV7 902 aaPredicted RBP25.3■■□□□ 1.64
NR6A1-201ENST00000344523 NRDE2Q9H7Z3 1164 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 SLC38A7Q9NVC3 462 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 IFNKQ9P0W0 207 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 SIX4Q9UIU6 781 aa25.3■■□□□ 1.64
NR6A1-201ENST00000344523 TEX33O43247 280 aa25.29■■□□□ 1.64
NR6A1-201ENST00000344523 STX10O60499 249 aa25.29■■□□□ 1.64
NR6A1-201ENST00000344523 ZC3H11AO75152 810 aaKnown RBP eCLIP25.29■■□□□ 1.642e-6■■■■■ 37.4
NR6A1-201ENST00000344523 TPM2P07951 284 aa25.29■■□□□ 1.64
NR6A1-201ENST00000344523 POLR2BP30876 1174 aaKnown RBP25.29■■□□□ 1.64
NR6A1-201ENST00000344523 ENPEPQ07075 957 aa25.29■■□□□ 1.64
NR6A1-201ENST00000344523 C15orf39Q6ZRI6 1047 aa25.29■■□□□ 1.64
NR6A1-201ENST00000344523 NT5DC4Q86YG4 428 aa25.29■■□□□ 1.64
NR6A1-201ENST00000344523 LCHNA4D1U4 455 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 F8W810 466 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 GTF2H1P32780 548 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 CLCNKBP51801 687 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 UBASH3AP57075 661 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 HTRA4P83105 476 aaPredicted RBP25.28■■□□□ 1.64
NR6A1-201ENST00000344523 MYL7Q01449 175 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 TUSC3Q13454 348 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 LRRC43Q8N309 656 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 CXorf38Q8TB03 319 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 SEMA4DQ92854 862 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 RAD9AQ99638 391 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 AGAP1Q9UPQ3 857 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 INSL6Q9Y581 213 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 GOLGA6L3A6NEY3 463 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 AP3M2P53677 418 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 UBXN1Q04323 297 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 DSC1Q08554 894 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 COLGALT2Q8IYK4 626 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 PI4K2AQ9BTU6 479 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 MRPL9Q9BYD2 267 aaKnown RBP25.28■■□□□ 1.64
NR6A1-201ENST00000344523 MRPL42Q9Y6G3 142 aaKnown RBP25.28■■□□□ 1.64
NR6A1-201ENST00000344523 COL4A6Q14031 1691 aa25.28■■□□□ 1.64
NR6A1-201ENST00000344523 LGALS16A8MUM7 142 aa25.27■■□□□ 1.64
NR6A1-201ENST00000344523 XPOTO43592 962 aaKnown RBP25.27■■□□□ 1.64
NR6A1-201ENST00000344523 HLA-DRAP01903 254 aa25.27■■□□□ 1.64
NR6A1-201ENST00000344523 BMP8BP34820 402 aa25.27■■□□□ 1.64
NR6A1-201ENST00000344523 OR1G1P47890 313 aa25.27■■□□□ 1.64
NR6A1-201ENST00000344523 SPOUT1Q5T280 376 aaKnown RBP25.27■■□□□ 1.64
NR6A1-201ENST00000344523 C9orf57Q5W0N0 161 aa25.27■■□□□ 1.64
NR6A1-201ENST00000344523 TSPAN18Q96SJ8 248 aa25.27■■□□□ 1.64
NR6A1-201ENST00000344523 CWH43Q9H720 699 aa25.27■■□□□ 1.64
NR6A1-201ENST00000344523 RTN4Q9NQC3 1192 aaKnown RBP25.27■■□□□ 1.64
NR6A1-201ENST00000344523 PRG3Q9Y2Y8 225 aaPredicted RBP25.27■■□□□ 1.64
NR6A1-201ENST00000344523 NT5C1B-RDH14C9J2C7 533 aa25.26■■□□□ 1.63
NR6A1-201ENST00000344523 CLSTN1O94985 981 aa25.26■■□□□ 1.63
NR6A1-201ENST00000344523 CYP3A5P20815 502 aa25.26■■□□□ 1.63
NR6A1-201ENST00000344523 MYL6P60660 151 aa25.26■■□□□ 1.63
NR6A1-201ENST00000344523 TRPC3Q13507 836 aa25.26■■□□□ 1.63
NR6A1-201ENST00000344523 NCOA4Q13772 614 aa25.26■■□□□ 1.63
NR6A1-201ENST00000344523 HASPINQ8TF76 798 aa25.26■■□□□ 1.63
NR6A1-201ENST00000344523 XPO4Q9C0E2 1151 aaKnown RBP25.26■■□□□ 1.63
NR6A1-201ENST00000344523 A0A1B0GTH6 734 aa25.26■■□□□ 1.63
NR6A1-201ENST00000344523 PIK3CAP42336 1068 aa25.26■■□□□ 1.63
NR6A1-201ENST00000344523 APBA1Q02410 837 aa25.26■■□□□ 1.63
NR6A1-201ENST00000344523 FILIP1LQ4L180 1135 aa25.26■■□□□ 1.63
NR6A1-201ENST00000344523 CMTR2Q8IYT2 770 aaKnown RBP25.26■■□□□ 1.63
NR6A1-201ENST00000344523 TDHQ8IZJ6 230 aa25.26■■□□□ 1.63
NR6A1-201ENST00000344523 FBXL13Q8NEE6 735 aa25.26■■□□□ 1.63
NR6A1-201ENST00000344523 ITGA11Q9UKX5 1188 aa25.26■■□□□ 1.63
NR6A1-201ENST00000344523 RALGAPA2Q2PPJ7 1873 aa25.25■■□□□ 1.63
NR6A1-201ENST00000344523 FSD2A1L4K1 749 aa25.25■■□□□ 1.63
NR6A1-201ENST00000344523 PODXLO00592 558 aa25.25■■□□□ 1.63
NR6A1-201ENST00000344523 UPP1Q16831 310 aa25.25■■□□□ 1.63
NR6A1-201ENST00000344523 UVSSAQ2YD98 709 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms