RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 LACRTQ9GZZ8 138 aa23.69■■□□□ 1.38
CACNB1-201ENST00000344140 GUCA1BQ9UMX6 200 aa23.69■■□□□ 1.38
CACNB1-201ENST00000344140 C2CD2Q9Y426 696 aa23.69■■□□□ 1.38
CACNB1-201ENST00000344140 RCCD1A6NED2 376 aa23.68■■□□□ 1.38
CACNB1-201ENST00000344140 PJA2O43164 708 aa23.68■■□□□ 1.38
CACNB1-201ENST00000344140 CUL2Q13617 745 aa23.68■■□□□ 1.38
CACNB1-201ENST00000344140 JADE1Q6IE81 842 aa23.68■■□□□ 1.38
CACNB1-201ENST00000344140 SENP6Q9GZR1 1112 aaPredicted RBP23.68■■□□□ 1.38
CACNB1-201ENST00000344140 APOBEC3GQ9HC16 384 aaKnown RBP23.68■■□□□ 1.38
CACNB1-201ENST00000344140 NAGPAQ9UK23 515 aa23.68■■□□□ 1.38
CACNB1-201ENST00000344140 MEFVO15553 781 aaPredicted RBP23.68■■□□□ 1.38
CACNB1-201ENST00000344140 CST3P01034 146 aaPredicted RBP23.68■■□□□ 1.38
CACNB1-201ENST00000344140 NFICP08651 508 aa23.68■■□□□ 1.38
CACNB1-201ENST00000344140 YARSP54577 528 aaKnown RBP23.68■■□□□ 1.38
CACNB1-201ENST00000344140 PTK7Q13308 1070 aa23.68■■□□□ 1.38
CACNB1-201ENST00000344140 NAB2Q15742 525 aa23.68■■□□□ 1.38
CACNB1-201ENST00000344140 TAF4BQ92750 862 aa23.68■■□□□ 1.38
CACNB1-201ENST00000344140 EIF2AQ9BY44 585 aaKnown RBP23.68■■□□□ 1.38
CACNB1-201ENST00000344140 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.68■■□□□ 1.38
CACNB1-201ENST00000344140 NOD1Q9Y239 953 aa23.68■■□□□ 1.38
CACNB1-201ENST00000344140 ATP8B3O60423 1300 aa23.67■■□□□ 1.38
CACNB1-201ENST00000344140 DDX3XO00571 662 aaKnown RBP eCLIP23.67■■□□□ 1.38
CACNB1-201ENST00000344140 ABL1P00519 1130 aa23.67■■□□□ 1.38
CACNB1-201ENST00000344140 TMEM132DQ14C87 1099 aa23.67■■□□□ 1.38
CACNB1-201ENST00000344140 SPOPLQ6IQ16 392 aa23.67■■□□□ 1.38
CACNB1-201ENST00000344140 ALKBH5Q6P6C2 394 aaKnown RBP23.67■■□□□ 1.38
CACNB1-201ENST00000344140 FAM228AQ86W67 206 aa23.67■■□□□ 1.38
CACNB1-201ENST00000344140 SLC30A5Q8TAD4 765 aa23.67■■□□□ 1.38
CACNB1-201ENST00000344140 WNT8BQ93098 351 aa23.67■■□□□ 1.38
CACNB1-201ENST00000344140 AGPAT1Q99943 283 aa23.67■■□□□ 1.38
CACNB1-201ENST00000344140 IRX2Q9BZI1 471 aaPredicted RBP23.67■■□□□ 1.38
CACNB1-201ENST00000344140 DERAQ9Y315 318 aa23.67■■□□□ 1.38
CACNB1-201ENST00000344140 R3HCC1Q9Y3T6 440 aaKnown RBP23.67■■□□□ 1.38
CACNB1-201ENST00000344140 NOC2LQ9Y3T9 749 aaKnown RBP23.67■■□□□ 1.38
CACNB1-201ENST00000344140 HTTP42858 3142 aa23.67■■□□□ 1.38
CACNB1-201ENST00000344140 CLSTN1O94985 981 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 TNFAIP3P21580 790 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 CASQ1P31415 396 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 MYL6P60660 151 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 ZNF569Q5MCW4 686 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 DHX38Q92620 1227 aaKnown RBP23.66■■□□□ 1.38
CACNB1-201ENST00000344140 WDR24Q96S15 920 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 TRIM10Q9UDY6 481 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 NENFQ9UMX5 172 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 NUB1Q9Y5A7 615 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 ANK1P16157 1881 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 CYP26A1O43174 497 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 RPS6KA5O75582 802 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 CHRNA1P02708 482 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 THPOP40225 353 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 MGAT3Q09327 533 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 ELMO3Q96BJ8 720 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 FAXDC2Q96IV6 333 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 SNTG2Q9NY99 539 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 TFR2Q9UP52 801 aa23.66■■□□□ 1.38
CACNB1-201ENST00000344140 CENPFP49454 3210 aa23.65■■□□□ 1.38
CACNB1-201ENST00000344140 CTSHP09668 335 aa23.65■■□□□ 1.38
CACNB1-201ENST00000344140 KRT5P13647 590 aa23.65■■□□□ 1.38
CACNB1-201ENST00000344140 BPIFB4P59827 614 aa23.65■■□□□ 1.38
CACNB1-201ENST00000344140 ZNF699Q32M78 642 aa23.65■■□□□ 1.38
CACNB1-201ENST00000344140 GLYCTKQ8IVS8 523 aa23.65■■□□□ 1.38
CACNB1-201ENST00000344140 C1orf127Q8N9H9 656 aa23.65■■□□□ 1.38
CACNB1-201ENST00000344140 EPS8L1Q8TE68 723 aa23.65■■□□□ 1.38
CACNB1-201ENST00000344140 SNX27Q96L92 541 aa23.65■■□□□ 1.38
CACNB1-201ENST00000344140 ARID3AQ99856 593 aa23.65■■□□□ 1.38
CACNB1-201ENST00000344140 NIF3L1Q9GZT8 377 aa23.65■■□□□ 1.38
CACNB1-201ENST00000344140 CHST12Q9NRB3 414 aa23.65■■□□□ 1.38
CACNB1-201ENST00000344140 A0A1W2PQ45 241 aaPredicted RBP23.64■■□□□ 1.38
CACNB1-201ENST00000344140 A0A1W2PQY0 241 aa23.64■■□□□ 1.38
CACNB1-201ENST00000344140 CAND2O75155 1236 aa23.64■■□□□ 1.38
CACNB1-201ENST00000344140 MYCP01106 439 aaPredicted RBP23.64■■□□□ 1.38
CACNB1-201ENST00000344140 PDE6CP51160 858 aa23.64■■□□□ 1.38
CACNB1-201ENST00000344140 UBXN11Q5T124 520 aa23.64■■□□□ 1.38
CACNB1-201ENST00000344140 LNX1Q8TBB1 728 aaPredicted RBP23.64■■□□□ 1.38
CACNB1-201ENST00000344140 SECISBP2LQ93073 1101 aaKnown RBP23.64■■□□□ 1.38
CACNB1-201ENST00000344140 TSPAN18Q96SJ8 248 aa23.64■■□□□ 1.38
CACNB1-201ENST00000344140 XYLT2Q9H1B5 865 aa23.64■■□□□ 1.38
CACNB1-201ENST00000344140 NOCTQ9UK39 431 aaKnown RBP23.64■■□□□ 1.38
CACNB1-201ENST00000344140 ITGA11Q9UKX5 1188 aa23.64■■□□□ 1.38
CACNB1-201ENST00000344140 INTUQ9ULD6 942 aa23.64■■□□□ 1.38
CACNB1-201ENST00000344140 PHF24Q9UPV7 400 aa23.64■■□□□ 1.38
CACNB1-201ENST00000344140 KBTBD13C9JR72 458 aa23.64■■□□□ 1.37
CACNB1-201ENST00000344140 GPR182O15218 404 aa23.64■■□□□ 1.37
CACNB1-201ENST00000344140 SGPL1O95470 568 aa23.64■■□□□ 1.37
CACNB1-201ENST00000344140 ATICP31939 592 aa23.64■■□□□ 1.37
CACNB1-201ENST00000344140 OLIG1Q8TAK6 271 aa23.64■■□□□ 1.37
CACNB1-201ENST00000344140 U2AF1L4Q8WU68 220 aaKnown RBP23.64■■□□□ 1.37
CACNB1-201ENST00000344140 KIF12Q96FN5 646 aa23.64■■□□□ 1.37
CACNB1-201ENST00000344140 SEZ6LQ9BYH1 1024 aa23.64■■□□□ 1.37
CACNB1-201ENST00000344140 NXF3Q9H4D5 531 aaKnown RBP23.64■■□□□ 1.37
CACNB1-201ENST00000344140 STARD7Q9NQZ5 370 aa23.64■■□□□ 1.37
CACNB1-201ENST00000344140 TRMT13Q9NUP7 481 aaKnown RBP23.64■■□□□ 1.37
CACNB1-201ENST00000344140 SIX4Q9UIU6 781 aa23.64■■□□□ 1.37
CACNB1-201ENST00000344140 ST3GAL5Q9UNP4 418 aa23.64■■□□□ 1.37
CACNB1-201ENST00000344140 A0A0U1RQG5 324 aaPredicted RBP23.63■■□□□ 1.37
CACNB1-201ENST00000344140 KRT19P08727 400 aa23.63■■□□□ 1.37
CACNB1-201ENST00000344140 CYP11B1P15538 503 aa23.63■■□□□ 1.37
CACNB1-201ENST00000344140 ACO1P21399 889 aaKnown RBP23.63■■□□□ 1.37
CACNB1-201ENST00000344140 TWF2Q6IBS0 349 aaKnown RBP23.63■■□□□ 1.37
CACNB1-201ENST00000344140 SLC47A2Q86VL8 602 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms