RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 RPL5P46777 297 aaKnown RBP8.63□□□□□ -1.03
ATG4A-201ENST00000343524 PTK2Q05397 1052 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 ZNF568Q3ZCX4 644 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 C1orf228Q6PIY5 440 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 OLFML1Q6UWY5 402 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 FAM47EQ6ZV65 393 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 SCUBE1Q8IWY4 988 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 DAGLBQ8NCG7 672 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 NKX2-3Q8TAU0 364 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 FNDC8Q8TC99 324 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 NSL1Q96IY1 281 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 AGBL1Q96MI9 1066 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 ZSCAN10Q96SZ4 725 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-201ENST00000343524 SETDB2Q96T68 719 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 MCOLN1Q9GZU1 580 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 Q9H521 79 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 HSFX1Q9UBD0 423 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 HDAC9Q9UKV0 1011 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 PCDHA4Q9UN74 947 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 ZMYM2Q9UBW7 1377 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 RIC1Q4ADV7 1423 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 RGPD2P0DJD1 1756 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 hCG_2014768A0A024R1R8 64 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 POTECB2RU33 542 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 ATP5J2-PTCD1G3V325 749 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 DDX3YO15523 660 aaKnown RBP8.62□□□□□ -1.03
ATG4A-201ENST00000343524 DNAJC6O75061 913 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 PTCD1O75127 700 aaKnown RBP8.62□□□□□ -1.03
ATG4A-201ENST00000343524 CBX6O95503 412 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 TTC4O95801 387 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 OR52Z1P0C646 297 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 ANPEPP15144 967 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 HOXD12P35452 270 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 NT5C2P49902 561 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 ARID5AQ03989 594 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 CDC16Q13042 620 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 CYP1B1Q16678 543 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 MAP7D1Q3KQU3 841 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 DNAL1Q4LDG9 190 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 ZC2HC1CQ53FD0 456 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-201ENST00000343524 SH3D19Q5HYK7 790 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 FAM91A1Q658Y4 838 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 BORAQ6PGQ7 559 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 DSTYKQ6XUX3 929 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 C3orf62Q6ZUJ4 267 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 PATL1Q86TB9 770 aaKnown RBP8.62□□□□□ -1.03
ATG4A-201ENST00000343524 TRIM59Q8IWR1 403 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 FAM186BQ8IYM0 893 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 ZBED8Q8IZ13 594 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 SCYL3Q8IZE3 742 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 MYOCDQ8IZQ8 938 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 BBOF1Q8ND07 529 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 OR6Y1Q8NGX8 325 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 SLCO2A1Q92959 643 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 EEF2KMTQ96G04 330 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 ZKSCAN3Q9BRR0 538 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 OSBPL8Q9BZF1 889 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 LAMB1P07942 1786 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 TMEM247A6NEH6 219 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 FAM196BA6NMK8 535 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 P4HA2O15460 535 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 THAP12O43422 761 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 SPAG7O75391 227 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 EIF2S1P05198 315 aaKnown RBP8.62□□□□□ -1.03
ATG4A-201ENST00000343524 ABHD2P08910 425 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 ITIH2P19823 946 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 TXKP42681 527 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 CHN2P52757 468 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 HADHBP55084 474 aaKnown RBP8.62□□□□□ -1.03
ATG4A-201ENST00000343524 ADCY1Q08828 1119 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 RASGRF1Q13972 1273 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 INAQ16352 499 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 CLPPQ16740 277 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-201ENST00000343524 TCERG1LQ5VWI1 586 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 PCNX4Q63HM2 1172 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 C11orf63Q6NUN7 778 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 RFWD3Q6PCD5 774 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 CCDC137Q6PK04 289 aaKnown RBP8.62□□□□□ -1.03
ATG4A-201ENST00000343524 SMIM5Q71RC9 77 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 ZNF571Q7Z3V5 609 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-201ENST00000343524 AMIGO3Q86WK7 504 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 RHOT2Q8IXI1 618 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 SRRM1Q8IYB3 904 aaKnown RBP8.62□□□□□ -1.03
ATG4A-201ENST00000343524 C12orf50Q8NA57 414 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-201ENST00000343524 CCDC110Q8TBZ0 833 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 DDI1Q8WTU0 396 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 SPIRE2Q8WWL2 714 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 PTCD3Q96EY7 689 aaKnown RBP8.62□□□□□ -1.03
ATG4A-201ENST00000343524 BTBD9Q96Q07 612 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 MIPEPQ99797 713 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 PLVAPQ9BX97 442 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 RAB34Q9BZG1 259 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 FOXP3Q9BZS1 431 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 SLC52A2Q9HAB3 445 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 ANKFY1Q9P2R3 1169 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 R3HDM2Q9Y2K5 976 aaKnown RBP8.62□□□□□ -1.03
ATG4A-201ENST00000343524 FADS3Q9Y5Q0 445 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 DOT1LQ8TEK3 1739 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 TAF1LQ8IZX4 1826 aa8.62□□□□□ -1.03
ATG4A-201ENST00000343524 TRIM43BA6NCK2 446 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms