RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 C4orf33Q8N1A6 199 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 TAB3Q8N5C8 712 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 EME1Q96AY2 570 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 RPL26L1Q9UNX3 145 aaKnown RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 H2AFYO75367 372 aaKnown RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 LACTB2Q53H82 288 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 ZNF746Q6NUN9 644 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 CATSPER3Q86XQ3 398 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 TERB1Q8NA31 727 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 THAP11Q96EK4 314 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 RIOK1Q9BRS2 568 aaKnown RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 RNPEPL1Q9HAU8 725 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 ITGB1BP2Q9UKP3 347 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 BAG5Q9UL15 447 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 A0A0U1RQJ8 604 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 CFLARO15519 480 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 SNX3O60493 162 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 GNAT1P11488 350 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 GRAPQ13588 217 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 FAM160B1Q5W0V3 765 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 CCNYQ8ND76 341 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 GRAPLQ8TC17 118 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 ZFRQ96KR1 1074 aaKnown RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 PCDHB2Q9Y5E7 798 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 ACTL7BQ9Y614 415 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 PARP4Q9UKK3 1724 aaKnown RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 ZSCAN5CA6NGD5 496 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 ATP9AO75110 1047 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 NUDT17P0C025 328 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 ROR2Q01974 943 aaKnown RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 CCDC15Q0P6D6 951 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 LRRC36Q1X8D7 754 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 EAPPQ56P03 285 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 CROCCP3Q8IVE0 287 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 PROCA1Q8NCQ7 364 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 KIAA0895Q8NCT3 520 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 DDX17Q92841 729 aaKnown RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 RNF25Q96BH1 459 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 SLAIN2Q9P270 581 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 ARHGAP23Q9P227 1491 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 TAC1P20366 129 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 EPHB1P54762 984 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 HEATR6Q6AI08 1181 aaKnown RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 SETD3Q86TU7 594 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 IQCKQ8N0W5 287 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 NEDD1Q8NHV4 660 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 NRBP2Q9NSY0 501 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 PIK3CDO00329 1044 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 KIAA0391O15091 583 aaKnown RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 HNRNPH3P31942 346 aaKnown RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 SERPINB9P50453 376 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 GRB10Q13322 594 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 HP1BP3Q5SSJ5 553 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 KIRREL3Q8IZU9 778 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 SYNE4Q8N205 404 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 BTBD10Q9BSF8 475 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 A0A087X0B3 334 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 NPHP3-ACAD11A0A0J9YXS1 232 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 UBE2Q2LH0YL09 131 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 GOLGA8RI6L899 631 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 QARSP47897 775 aaKnown RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 ALDH18A1P54886 795 aaKnown RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 TFDP1Q14186 410 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 RASA2Q15283 850 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 PBXIP1Q96AQ6 731 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 MRPL1Q9BYD6 325 aaKnown RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 ING2Q9H160 280 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 ZWILCHQ9H900 591 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 TMEM8AQ9HCN3 771 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 SLC24A2Q9UI40 661 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 NAALADL1Q9UQQ1 740 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 HOXA13P31271 388 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 KIF19Q2TAC6 998 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 FAM160B2Q86V87 743 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 SCUBE1Q8IWY4 988 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 ZNF398Q8TD17 642 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 SCG3Q8WXD2 468 aaKnown RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 OSGEPQ9NPF4 335 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 GOLGA8IPA6NC78 632 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 GOLGA8JA6NMD2 632 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 RBAK-RBAKDNI3L0D1 243 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 WFS1O76024 890 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 MYBL2P10244 700 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 MUTP22033 750 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 COPAP53621 1224 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 PTK7Q13308 1070 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 ZNF184Q99676 751 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 NUB1Q9Y5A7 615 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 B2RBV5 119 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 C21orf2O43822 256 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 KDM1AO60341 852 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 RASSF9O75901 435 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 OCRLQ01968 901 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 EFTUD2Q15029 972 aaKnown RBP eCLIP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 PASD1Q8IV76 773 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 POLR3CQ9BUI4 534 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 ZNF219Q9P2Y4 722 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 SEPT3Q9UH03 358 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 SKAP2O75563 359 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms