RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 CYP11B2P19099 503 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 DUOXA2Q1HG44 320 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 C2CD6Q53TS8 623 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 STRIP1Q5VSL9 837 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 TRIM67Q6ZTA4 783 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 C3orf67Q6ZVT6 689 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 HDAC7Q8WUI4 952 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 PRPF31Q8WWY3 499 aaKnown RBP8.51□□□□□ -1.05
UBE4B-202ENST00000343090 ACSF2Q96CM8 615 aaPredicted RBP8.51□□□□□ -1.05
UBE4B-202ENST00000343090 MCEEQ96PE7 176 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 RBM15Q96T37 977 aaKnown RBP eCLIP8.51□□□□□ -1.05
UBE4B-202ENST00000343090 CYP4F11Q9HBI6 524 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 PLAGL2Q9UPG8 496 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 APOBEC2Q9Y235 224 aaKnown RBP8.51□□□□□ -1.05
UBE4B-202ENST00000343090 SUGT1Q9Y2Z0 365 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 PFDN6O15212 129 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 TPP2P29144 1249 aaPredicted RBP8.51□□□□□ -1.05
UBE4B-202ENST00000343090 RGS7P49802 495 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 EIF3EP60228 445 aaKnown RBP8.51□□□□□ -1.05
UBE4B-202ENST00000343090 HIF1AQ16665 826 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 KYNUQ16719 465 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 ARL13BQ3SXY8 428 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 C1orf146Q5VVC0 180 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 ENOSF1Q7L5Y1 443 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 APLFQ8IW19 511 aaPredicted RBP8.51□□□□□ -1.05
UBE4B-202ENST00000343090 ATP11CQ8NB49 1132 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 FAM161BQ96MY7 647 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 TMEM39BQ9GZU3 492 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 TBX3O15119 743 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 S100BP04271 92 aaPredicted RBP8.51□□□□□ -1.05
UBE4B-202ENST00000343090 GHRP10912 638 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 LCP1P13796 627 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 OCRLQ01968 901 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 FOXD4Q12950 439 aaPredicted RBP8.51□□□□□ -1.05
UBE4B-202ENST00000343090 CDKAL1Q5VV42 579 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 TSEN2Q8NCE0 465 aaKnown RBP8.51□□□□□ -1.05
UBE4B-202ENST00000343090 DAGLBQ8NCG7 672 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 KLF6Q99612 283 aaPredicted RBP8.51□□□□□ -1.05
UBE4B-202ENST00000343090 FBXO28Q9NVF7 368 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 CPSF3Q9UKF6 684 aaKnown RBP8.51□□□□□ -1.05
UBE4B-202ENST00000343090 SMIM22K7EJ46 135 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 NFIAQ12857 509 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 HEATR6Q6AI08 1181 aaKnown RBP8.51□□□□□ -1.05
UBE4B-202ENST00000343090 TWF2Q6IBS0 349 aaKnown RBP8.51□□□□□ -1.05
UBE4B-202ENST00000343090 SLC30A10Q6XR72 485 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 NUDCD3Q8IVD9 361 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 AGGF1Q8N302 714 aaeCLIP8.51□□□□□ -1.053e-8■■■■□ 22.1
UBE4B-202ENST00000343090 CCNYL1Q8N7R7 359 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.51□□□□□ -1.05
UBE4B-202ENST00000343090 CAVIN3Q969G5 261 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 TTC1Q99614 292 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 FGFR1OP2Q9NVK5 253 aa8.51□□□□□ -1.05
UBE4B-202ENST00000343090 VWDEQ8N2E2 1590 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 BNIP3LO60238 219 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 GRAP2O75791 330 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 AGTP01019 485 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 ATP4AP20648 1035 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 PON1P27169 355 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 TNFAIP2Q03169 654 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 ITIH4Q14624 930 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 ANKRD20A4Q4UJ75 823 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 ANKRD20A2Q5SQ80 823 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 ANKRD20A1Q5TYW2 823 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 RGS9BPQ6ZS82 235 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 RBBP8NLQ8NC74 664 aaPredicted RBP8.5□□□□□ -1.05
UBE4B-202ENST00000343090 TPCN2Q8NHX9 752 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 SDCCAG3Q96C92 435 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 KIF12Q96FN5 646 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 PPP1R36Q96LQ0 422 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 ISCUQ9H1K1 167 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 CYP26B1Q9NR63 512 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 KBTBD4Q9NVX7 518 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 DDX56Q9NY93 547 aaKnown RBP8.5□□□□□ -1.05
UBE4B-202ENST00000343090 ZNF70Q9UC06 446 aaPredicted RBP8.5□□□□□ -1.05
UBE4B-202ENST00000343090 FBXO40Q9UH90 709 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 TECPR2O15040 1411 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 A8MXQ7 604 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 HUS1O60921 280 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 PRKCBP05771 671 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 TMEM253P0C7T8 217 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 STAT5BP51692 787 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 SLC29A2Q14542 456 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 GRAMD4Q6IC98 578 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 HHIPL2Q6UWX4 724 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 TRIM72Q6ZMU5 477 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 BBS5Q8N3I7 341 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 A1CFQ9NQ94 594 aaKnown RBP8.5□□□□□ -1.05
UBE4B-202ENST00000343090 GTSE1Q9NYZ3 720 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 WTIPA6NIX2 430 aaPredicted RBP8.5□□□□□ -1.05
UBE4B-202ENST00000343090 GNGT2O14610 69 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 SERPINB3P29508 390 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 PMLP29590 882 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 MDM2Q00987 491 aaPredicted RBP8.5□□□□□ -1.05
UBE4B-202ENST00000343090 NCOA4Q13772 614 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 SMTNL2Q2TAL5 461 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 SEZ6Q53EL9 994 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 BZW1Q7L1Q6 419 aaKnown RBP8.5□□□□□ -1.05
UBE4B-202ENST00000343090 RMDN2Q96LZ7 410 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 BEGAINQ9BUH8 593 aa8.5□□□□□ -1.05
UBE4B-202ENST00000343090 UNC45AQ9H3U1 944 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms