RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 GARTP22102 1010 aa16.51■□□□□ 0.23
CARMIL3-201ENST00000342740 FBXO16Q8IX29 292 aaPredicted RBP16.51■□□□□ 0.23
CARMIL3-201ENST00000342740 ATP11CQ8NB49 1132 aa16.51■□□□□ 0.23
CARMIL3-201ENST00000342740 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.51■□□□□ 0.23
CARMIL3-201ENST00000342740 HPDLQ96IR7 371 aa16.51■□□□□ 0.23
CARMIL3-201ENST00000342740 TTC1Q99614 292 aa16.51■□□□□ 0.23
CARMIL3-201ENST00000342740 BFARQ9NZS9 450 aa16.51■□□□□ 0.23
CARMIL3-201ENST00000342740 CDK17Q00537 523 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 E2F4Q16254 413 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 TMEM119Q4V9L6 283 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 USP38Q8NB14 1042 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 TRIM56Q9BRZ2 755 aaKnown RBP16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 FSD1LQ9BXM9 530 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 L2HGDHQ9H9P8 463 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 DISP2A7MBM2 1401 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 GRAP2O75791 330 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 BTBD8Q5XKL5 378 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 KCNK18Q7Z418 384 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 ARHGAP20Q9P2F6 1191 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 CUL2Q13617 745 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 AFG1LQ8WV93 481 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 MTMR9Q96QG7 549 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 NUF2Q9BZD4 464 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 RAD51CO43502 376 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 CPB1P15086 417 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 FGFR4P22455 802 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 ATG16L1Q676U5 607 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 SH3RF1Q7Z6J0 888 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 TPCN2Q8NHX9 752 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 THOC1Q96FV9 657 aaKnown RBP16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 DUSP9Q99956 384 aaKnown RBP16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 CAPN6Q9Y6Q1 641 aa16.5■□□□□ 0.23
CARMIL3-201ENST00000342740 PIK3C2AO00443 1686 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 MON2Q7Z3U7 1717 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 EML1O00423 815 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 APOL1O14791 398 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 CLNS1AP54105 237 aaKnown RBP16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 HNRNPH2P55795 449 aaKnown RBP16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 SESN3P58005 492 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 TMPRSS15P98073 1019 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 BIRC2Q13490 618 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 PID1Q7Z2X4 250 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 GCNAQ96QF7 691 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 POP1Q99575 1024 aaKnown RBP16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 DBR1Q9UK59 544 aaKnown RBP16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 FAM237AA0A1B0GTK4 181 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 CTIFO43310 598 aaKnown RBP16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 ITGB3P05106 788 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 HERVK_113P62684 666 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 ANGPTL3Q9Y5C1 460 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 S100BP04271 92 aaPredicted RBP16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 BRD2P25440 801 aaKnown RBP16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 CYP2C19P33261 490 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 KCNJ1P48048 391 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 GCLCP48506 637 aaPredicted RBP16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 MUM1Q2TAK8 710 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 NOTUMQ6P988 496 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 DNERQ8NFT8 737 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 TAS1R2Q8TE23 839 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 DHX38Q92620 1227 aaKnown RBP16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 SLC5A5Q92911 643 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 CARD9Q9H257 536 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 FIS1Q9Y3D6 152 aa16.49■□□□□ 0.23
CARMIL3-201ENST00000342740 SGPL1O95470 568 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 HIF1AQ16665 826 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 TAF1BQ53T94 588 aaPredicted RBP16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 METTL7BQ6UX53 244 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 MAML1Q92585 1016 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 TRAIPQ9BWF2 469 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 SLIT3O75094 1523 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 TRAPPC3O43617 180 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 CARSP49589 748 aaKnown RBP16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 SOX10P56693 466 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 CDR2Q01850 454 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 TSTA3Q13630 321 aaPredicted RBP16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 MAP7Q14244 749 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 MYBPC2Q14324 1141 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 ACAD10Q6JQN1 1059 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 SYDE1Q6ZW31 735 aaPredicted RBP16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 EHD2Q9NZN4 543 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 KCNH4Q9UQ05 1017 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 TRAF3IP3Q9Y228 551 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 NPTXRO95502 500 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 MDM2Q00987 491 aaPredicted RBP16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 JAMLQ86YT9 394 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 FEZF2Q8TBJ5 459 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 ZNF507Q8TCN5 953 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 SYNPO2Q9UMS6 1093 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 GMNCA6NCL1 334 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 PAMP19021 973 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 ZNF484Q5JVG2 852 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 MMGT1Q8N4V1 131 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 UBA3Q8TBC4 463 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 ANKRD7Q92527 254 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 PACSIN1Q9BY11 444 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 VIPAS39Q9H9C1 493 aa16.48■□□□□ 0.23
CARMIL3-201ENST00000342740 ANKRD65E5RJM6 399 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 NOL3O60936 208 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms