RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 AKAP5P24588 427 aa13.98□□□□□ -0.17
COL18A1-201ENST00000342220 PPARDQ03181 441 aa13.98□□□□□ -0.17
COL18A1-201ENST00000342220 LLGL2Q6P1M3 1020 aa13.98□□□□□ -0.17
COL18A1-201ENST00000342220 TCP11Q8WWU5 503 aa13.98□□□□□ -0.17
COL18A1-201ENST00000342220 HAPLN2Q9GZV7 340 aa13.98□□□□□ -0.17
COL18A1-201ENST00000342220 VTA1Q9NP79 307 aa13.98□□□□□ -0.17
COL18A1-201ENST00000342220 CAPN7Q9Y6W3 813 aa13.98□□□□□ -0.17
COL18A1-201ENST00000342220 TREHO43280 583 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 PALMO75781 387 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 SOX5P35711 763 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 RFC5P40937 340 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 DEFB115Q30KQ5 88 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 SHCBP1Q8NEM2 672 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 CDHR5Q9HBB8 845 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 ARHGAP28Q9P2N2 729 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 ZSCAN5CA6NGD5 496 aaPredicted RBP13.97□□□□□ -0.17
COL18A1-201ENST00000342220 RGS2P41220 211 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 RAP1GAPP47736 663 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 EPHB4P54760 987 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 DUSP28Q4G0W2 176 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 DAAM2Q86T65 1068 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 BTBD6Q96KE9 485 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 CAPNS2Q96L46 248 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 EDEM3Q9BZQ6 932 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 PIN4Q9Y237 131 aaKnown RBP13.97□□□□□ -0.17
COL18A1-201ENST00000342220 PTPRJQ12913 1337 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 UMODL1Q5DID0 1318 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 ESYT3A0FGR9 886 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 MYADML2A6NDP7 307 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 F8VZ95 297 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 EBAG9O00559 213 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 MMP3P08254 477 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 IQCF3P0C7M6 154 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 GRB14Q14449 540 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 MXD4Q14582 209 aaPredicted RBP13.97□□□□□ -0.17
COL18A1-201ENST00000342220 C11orf91Q3C1V1 193 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 CPA5Q8WXQ8 436 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 CTNNBL1Q8WYA6 563 aaPredicted RBP13.97□□□□□ -0.17
COL18A1-201ENST00000342220 ARL8AQ96BM9 186 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 OSGEPQ9NPF4 335 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 USTQ9Y2C2 406 aa13.97□□□□□ -0.17
COL18A1-201ENST00000342220 KLHL33A6NCF5 533 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 GLI1P08151 1106 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 H2AFZP0C0S5 128 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 ARL2P36404 184 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 PHKA2P46019 1235 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 IRAK1P51617 712 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 CDH8P55286 799 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 SREBF2Q12772 1141 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 WDR72Q3MJ13 1102 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 H2AFVQ71UI9 128 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 FMNL3Q8IVF7 1028 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 RNF10Q8N5U6 811 aaKnown RBP13.96□□□□□ -0.17
COL18A1-201ENST00000342220 LMBR1Q8WVP7 490 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 SPIRE2Q8WWL2 714 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 RPF1Q9H9Y2 349 aaKnown RBP13.96□□□□□ -0.17
COL18A1-201ENST00000342220 DMAC2Q9NW81 257 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 EXTL3O43909 919 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 SHOX2O60902 331 aaPredicted RBP13.96□□□□□ -0.17
COL18A1-201ENST00000342220 CST3P01034 146 aaPredicted RBP13.96□□□□□ -0.17
COL18A1-201ENST00000342220 INHBEP58166 350 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 NCOA4Q13772 614 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 MESDQ14696 234 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 KIF22Q14807 665 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 CFAP221Q4G0U5 840 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 MKNK1Q9BUB5 465 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 CACNG4Q9UBN1 327 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 PAPPA2Q9BXP8 1791 aa13.96□□□□□ -0.17
COL18A1-201ENST00000342220 MYO1FO00160 1098 aa13.96□□□□□ -0.18
COL18A1-201ENST00000342220 ATG7O95352 703 aa13.96□□□□□ -0.18
COL18A1-201ENST00000342220 MMEP08473 750 aa13.96□□□□□ -0.18
COL18A1-201ENST00000342220 CARSP49589 748 aaKnown RBP13.96□□□□□ -0.18
COL18A1-201ENST00000342220 MYL6P60660 151 aa13.96□□□□□ -0.18
COL18A1-201ENST00000342220 KIRREL3Q8IZU9 778 aa13.96□□□□□ -0.18
COL18A1-201ENST00000342220 ZNF516Q92618 1163 aa13.96□□□□□ -0.18
COL18A1-201ENST00000342220 TAF4BQ92750 862 aa13.96□□□□□ -0.18
COL18A1-201ENST00000342220 CABS1Q96KC9 395 aa13.96□□□□□ -0.18
COL18A1-201ENST00000342220 CENPHQ9H3R5 247 aa13.96□□□□□ -0.18
COL18A1-201ENST00000342220 H0YCG3 227 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 KCNK3O14649 394 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 NPTXRO95502 500 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 CTGFP29279 349 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 MFAP3P55082 362 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 TTMPQ5BVD1 217 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 TWF2Q6IBS0 349 aaKnown RBP13.95□□□□□ -0.18
COL18A1-201ENST00000342220 EMBQ6PCB8 327 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 SMC1BQ8NDV3 1235 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 CD99L2Q8TCZ2 262 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 RAET1EQ8TD07 263 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 IFT81Q8WYA0 676 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 RUBCNQ92622 972 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 SH3GL2Q99962 352 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 ADPGKQ9BRR6 497 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 TIPINQ9BVW5 301 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 SPC25Q9HBM1 224 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 SIX2Q9NPC8 291 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 NFU1Q9UMS0 254 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 SLC15A5A6NIM6 579 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 THAP12O43422 761 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 TOM1L1O75674 476 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms