RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 IFRD2Q12894 506 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 ZNF530Q6P9A1 599 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 ZNF532Q9HCE3 1301 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 M0R2C6 588 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 KIAA1211LQ6NV74 962 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 DNAJA3Q96EY1 480 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 GXYLT2A0PJZ3 443 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 PDAP1Q13442 181 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 CASP10Q92851 521 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 FAM8A1Q9UBU6 413 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 EVX2Q03828 476 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 PDIA2Q13087 525 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 NR1I3Q14994 352 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 FGD4Q96M96 766 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 NLRP4Q96MN2 994 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 RNF41Q9H4P4 317 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 ZWILCHQ9H900 591 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 MTMR6Q9Y217 621 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 SSU72P8A0A1W2PR75 194 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 PEX5P50542 639 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 ARSHQ5FYA8 562 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 PTAR1Q7Z6K3 402 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 EPN1Q9Y6I3 576 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 TULP4Q9NRJ4 1543 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 MBD4O95243 580 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 ZNF12P17014 697 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 HDAC4P56524 1084 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 GEMIN4P57678 1058 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 MTHFSDQ2M296 383 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 HAUS3Q68CZ6 603 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 CCNI2Q6ZMN8 369 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 DBF4Q9UBU7 674 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 PLAGL2Q9UPG8 496 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 LRRC37A3O60309 1634 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 GMPRP36959 345 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 PAPOLAP51003 745 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 UXS1Q8NBZ7 420 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 SGF29Q96ES7 293 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 CELF4Q9BZC1 486 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 PADI4Q9UM07 663 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 COMMD3-BMI1R4GMX3 469 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 A6NL46 340 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 RASGRF2O14827 1237 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 OTUD4Q01804 1114 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 ASPHQ12797 758 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 KBTBD12Q3ZCT8 623 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 BRSK2Q8IWQ3 736 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 ZNF512BQ96KM6 892 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 KLHL14Q9P2G3 628 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 ASCC3Q8N3C0 2202 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 KRT8P05787 483 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 ATP6V1B1P15313 513 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 POLR2FP61218 127 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 DSTYKQ6XUX3 929 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 P4HA2O15460 535 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 COQ9O75208 318 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 TOMM70O94826 608 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 VIL1P09327 827 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 NECTIN1Q15223 517 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 HDDC2Q7Z4H3 204 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 NRBF2Q96F24 287 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 XPO6Q96QU8 1125 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 RNF32Q9H0A6 362 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 RNF40O75150 1001 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 GRIK3Q13003 919 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 RINT1Q6NUQ1 792 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 NEDD4LQ96PU5 975 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 TRAF3IP3Q9Y228 551 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 AGRNO00468 2067 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 MYOFQ9NZM1 2061 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 AOC2O75106 756 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 MT-CO1P00395 513 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 TMEM154Q6P9G4 183 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 PCNPQ8WW12 178 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 CYFIP2Q96F07 1278 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 AK8Q96MA6 479 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 MRPL44Q9H9J2 332 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 ST14Q9Y5Y6 855 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 PI4KAP42356 2102 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 ABCA7Q8IZY2 2146 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 RNF225M0QZC1 329 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 BANF1O75531 89 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 ANP32DO95626 131 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 P4HA1P13674 534 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 BRCA1P38398 1863 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 RPS6KA3P51812 740 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 GPR162Q16538 588 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 RBM15BQ8NDT2 890 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 EXD1Q8NHP7 514 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 NUDT16L1Q9BRJ7 211 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 RANBP17Q9H2T7 1088 aaKnown RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 UCKL1Q9NWZ5 548 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 ATP6V0A2Q9Y487 856 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 GREB1LQ9C091 1923 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-201ENST00000341594 ATG7O95352 703 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 ETS1P14921 441 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 PARP9Q8IXQ6 854 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 TRIM47Q96LD4 638 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 SMARCAD1Q9H4L7 1026 aa3.74□□□□□ -1.81
SYNE1-201ENST00000341594 CAPN6Q9Y6Q1 641 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms