RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.97■■□□□ 1.11
SYNE2-201ENST00000341472 CDY1Q9Y6F8 540 aa21.97■■□□□ 1.11
SYNE2-201ENST00000341472 TECTAO75443 2155 aa21.97■■□□□ 1.11
SYNE2-201ENST00000341472 TTC26A0AVF1 554 aa21.96■■□□□ 1.11
SYNE2-201ENST00000341472 MYMKA6NI61 221 aa21.96■■□□□ 1.11
SYNE2-201ENST00000341472 LACTBL1A8MY62 500 aa21.96■■□□□ 1.11
SYNE2-201ENST00000341472 SYN3O14994 580 aa21.96■■□□□ 1.11
SYNE2-201ENST00000341472 C8AP07357 584 aa21.96■■□□□ 1.11
SYNE2-201ENST00000341472 HSP90AA1P07900 732 aaKnown RBP21.96■■□□□ 1.11
SYNE2-201ENST00000341472 PDIA4P13667 645 aaKnown RBP21.96■■□□□ 1.11
SYNE2-201ENST00000341472 NASPP49321 788 aaPredicted RBP21.96■■□□□ 1.11
SYNE2-201ENST00000341472 SPAG1Q07617 926 aa21.96■■□□□ 1.11
SYNE2-201ENST00000341472 UVSSAQ2YD98 709 aa21.96■■□□□ 1.11
SYNE2-201ENST00000341472 ZC2HC1CQ53FD0 456 aaPredicted RBP21.96■■□□□ 1.11
SYNE2-201ENST00000341472 AXDND1Q5T1B0 1012 aaPredicted RBP21.96■■□□□ 1.11
SYNE2-201ENST00000341472 RSPO2Q6UXX9 243 aaPredicted RBP21.96■■□□□ 1.11
SYNE2-201ENST00000341472 ZNF720Q7Z2F6 126 aa21.96■■□□□ 1.11
SYNE2-201ENST00000341472 DDX12PQ92771 950 aa21.96■■□□□ 1.11
SYNE2-201ENST00000341472 KIF12Q96FN5 646 aa21.96■■□□□ 1.11
SYNE2-201ENST00000341472 MSTO1Q9BUK6 570 aa21.96■■□□□ 1.11
SYNE2-201ENST00000341472 KCNH6Q9H252 994 aa21.96■■□□□ 1.11
SYNE2-201ENST00000341472 ST6GALNAC4Q9H4F1 302 aa21.96■■□□□ 1.11
SYNE2-201ENST00000341472 CLUHO75153 1309 aa21.96■■□□□ 1.11
SYNE2-201ENST00000341472 TRIOO75962 3097 aa21.95■■□□□ 1.1
SYNE2-201ENST00000341472 H7C4K7 107 aa21.95■■□□□ 1.1
SYNE2-201ENST00000341472 TNFSF9P41273 254 aa21.95■■□□□ 1.1
SYNE2-201ENST00000341472 PPP2R3AQ06190 1150 aa21.95■■□□□ 1.1
SYNE2-201ENST00000341472 ZBTB6Q15916 424 aa21.95■■□□□ 1.1
SYNE2-201ENST00000341472 VARS2Q5ST30 1063 aaKnown RBP21.95■■□□□ 1.1
SYNE2-201ENST00000341472 SLFN12LQ6IEE8 588 aa21.95■■□□□ 1.1
SYNE2-201ENST00000341472 RTL10Q7L3V2 364 aa21.95■■□□□ 1.1
SYNE2-201ENST00000341472 MAP4K3Q8IVH8 894 aa21.95■■□□□ 1.1
SYNE2-201ENST00000341472 LINC00301Q8NCQ3 95 aa21.95■■□□□ 1.1
SYNE2-201ENST00000341472 TSPAN18Q96SJ8 248 aa21.95■■□□□ 1.1
SYNE2-201ENST00000341472 KCNK12Q9HB15 430 aa21.95■■□□□ 1.1
SYNE2-201ENST00000341472 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.95■■□□□ 1.1
SYNE2-201ENST00000341472 IGSF9Q9P2J2 1179 aa21.95■■□□□ 1.1
SYNE2-201ENST00000341472 TUBGCP4Q9UGJ1 667 aa21.95■■□□□ 1.1
SYNE2-201ENST00000341472 UBQLN1Q9UMX0 589 aaKnown RBP21.95■■□□□ 1.1
SYNE2-201ENST00000341472 ANKRD63C9JTQ0 380 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 XPOTO43592 962 aaKnown RBP21.94■■□□□ 1.1
SYNE2-201ENST00000341472 N4BP1O75113 896 aaKnown RBP21.94■■□□□ 1.1
SYNE2-201ENST00000341472 XYLBO75191 536 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 GAP43P17677 238 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 CYP3A5P20815 502 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 STAT6P42226 847 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 TDGQ13569 410 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 ENOX2Q16206 610 aaKnown RBP21.94■■□□□ 1.1
SYNE2-201ENST00000341472 ZBTB41Q5SVQ8 909 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 SFR1Q86XK3 245 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 CD302Q8IX05 232 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 APPL2Q8NEU8 664 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 FAM212AQ96EL1 285 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 SUSD3Q96L08 255 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 MYADMQ96S97 322 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 SMOC2Q9H3U7 446 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 EPS15L1Q9UBC2 864 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 SEL1LQ9UBV2 794 aa21.94■■□□□ 1.1
SYNE2-201ENST00000341472 SPTLC2O15270 562 aa21.93■■□□□ 1.1
SYNE2-201ENST00000341472 ADRB2P07550 413 aa21.93■■□□□ 1.1
SYNE2-201ENST00000341472 FSHRP23945 695 aa21.93■■□□□ 1.1
SYNE2-201ENST00000341472 LRPAP1P30533 357 aa21.93■■□□□ 1.1
SYNE2-201ENST00000341472 HOXA9P31269 272 aa21.93■■□□□ 1.1
SYNE2-201ENST00000341472 MCM4P33991 863 aa21.93■■□□□ 1.1
SYNE2-201ENST00000341472 MRPL58Q14197 206 aaKnown RBP21.93■■□□□ 1.1
SYNE2-201ENST00000341472 FOXD4L5Q5VV16 416 aaPredicted RBP21.93■■□□□ 1.1
SYNE2-201ENST00000341472 ADALQ6DHV7 355 aa21.93■■□□□ 1.1
SYNE2-201ENST00000341472 SLC8B1Q6J4K2 584 aa21.93■■□□□ 1.1
SYNE2-201ENST00000341472 SLC39A4Q6P5W5 647 aa21.93■■□□□ 1.1
SYNE2-201ENST00000341472 GRASPQ7Z6J2 395 aaPredicted RBP21.93■■□□□ 1.1
SYNE2-201ENST00000341472 ZNF461Q8TAF7 563 aa21.93■■□□□ 1.1
SYNE2-201ENST00000341472 SLC7A14Q8TBB6 771 aa21.93■■□□□ 1.1
SYNE2-201ENST00000341472 FOXD4L4Q8WXT5 416 aaPredicted RBP21.93■■□□□ 1.1
SYNE2-201ENST00000341472 DNAJC19Q96DA6 116 aa21.93■■□□□ 1.1
SYNE2-201ENST00000341472 MRPL44Q9H9J2 332 aaKnown RBP21.93■■□□□ 1.1
SYNE2-201ENST00000341472 POLIQ9UNA4 740 aa21.93■■□□□ 1.1
SYNE2-201ENST00000341472 TDRD15B5MCY1 1934 aaKnown RBP21.92■■□□□ 1.1
SYNE2-201ENST00000341472 CCL16O15467 120 aa21.92■■□□□ 1.1
SYNE2-201ENST00000341472 FAM189A1O60320 539 aa21.92■■□□□ 1.1
SYNE2-201ENST00000341472 TBC1D4O60343 1298 aa21.92■■□□□ 1.1
SYNE2-201ENST00000341472 PPP6R2O75170 966 aa21.92■■□□□ 1.1
SYNE2-201ENST00000341472 ELF1P32519 619 aa21.92■■□□□ 1.1
SYNE2-201ENST00000341472 ARPP19P56211 112 aa21.92■■□□□ 1.1
SYNE2-201ENST00000341472 NXPE3Q969Y0 559 aa21.92■■□□□ 1.1
SYNE2-201ENST00000341472 HVCN1Q96D96 273 aa21.92■■□□□ 1.1
SYNE2-201ENST00000341472 CPSF3Q9UKF6 684 aaKnown RBP21.92■■□□□ 1.1
SYNE2-201ENST00000341472 PCDHB8Q9UN66 801 aa21.92■■□□□ 1.1
SYNE2-201ENST00000341472 MUC6Q6W4X9 2439 aa21.91■■□□□ 1.1
SYNE2-201ENST00000341472 ZDBF2Q9HCK1 2354 aa21.91■■□□□ 1.1
SYNE2-201ENST00000341472 LAMP2P13473 410 aa21.91■■□□□ 1.1
SYNE2-201ENST00000341472 IDEP14735 1019 aa21.91■■□□□ 1.1
SYNE2-201ENST00000341472 ACOT2P49753 483 aa21.91■■□□□ 1.1
SYNE2-201ENST00000341472 POSTNQ15063 836 aa21.91■■□□□ 1.1
SYNE2-201ENST00000341472 CTXN3Q4LDR2 81 aa21.91■■□□□ 1.1
SYNE2-201ENST00000341472 GET4Q7L5D6 327 aaPredicted RBP21.91■■□□□ 1.1
SYNE2-201ENST00000341472 PDILTQ8N807 584 aa21.91■■□□□ 1.1
SYNE2-201ENST00000341472 TBC1D7Q9P0N9 293 aa21.91■■□□□ 1.1
SYNE2-201ENST00000341472 FBXL5Q9UKA1 691 aa21.91■■□□□ 1.1
SYNE2-201ENST00000341472 AGO2Q9UKV8 859 aaKnown RBP21.91■■□□□ 1.1
SYNE2-201ENST00000341472 EXOC7Q9UPT5 735 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms