RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 AZI2Q9H6S1 392 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 SCPEP1Q9HB40 452 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 GPR108Q9NPR9 543 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 RBM12Q9NTZ6 932 aaKnown RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 PPP1R14DQ9NXH3 145 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 TMEM9Q9P0T7 183 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 NKX1-2Q9UD57 310 aaPredicted RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 MAN1B1Q9UKM7 699 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 SORCS3Q9UPU3 1222 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 MAD1L1Q9Y6D9 718 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 SSU72P8A0A1W2PR75 194 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 TRPC5OSA6NMA1 111 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 RNF103O00237 685 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 TRDMT1O14717 391 aaKnown RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 TMCC2O75069 709 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 JRKO75564 520 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 MCF2P10911 925 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 ANPEPP15144 967 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 AP3M2P53677 418 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 PPP2R2BQ00005 443 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 CAV1Q03135 178 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 GRSF1Q12849 480 aaKnown RBP eCLIP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 GIT2Q14161 759 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 CRY1Q16526 586 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 TEDDM1Q5T9Z0 273 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 TMEM214Q6NUQ4 689 aaKnown RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 TAS2R42Q7RTR8 314 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 TMPRSS6Q8IU80 811 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 CAMK1DQ8IU85 385 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 NOSTRINQ8IVI9 506 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 RHPN1Q8TCX5 695 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 ACTRT1Q8TDG2 376 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 CEP295NLQ96MC4 621 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 TSNARE1Q96NA8 513 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 C17orf80Q9BSJ5 609 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 TBC1D10AQ9BXI6 508 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 OCEL1Q9H607 264 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 DENND2DQ9H6A0 471 aaPredicted RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 NHEJ1Q9H9Q4 299 aaPredicted RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 ZNF287Q9HBT7 754 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 ANKHQ9HCJ1 492 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 ZNF277Q9NRM2 450 aaPredicted RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 INTS13Q9NVM9 706 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 DDX18Q9NVP1 670 aaKnown RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 CLIC5Q9NZA1 410 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 TMA7Q9Y2S6 64 aaKnown RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 C15orf38-AP3S2A0A0A6YYH1 394 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 KCNJ18B7U540 433 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 H0YGN5 161 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 INO80B-WBP1J3KQ70 363 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 DENRO43583 198 aaKnown RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 OR5F1O95221 314 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 MYBP10242 640 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 KRT13P13646 458 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 VBP1P61758 197 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 KCNJ12Q14500 433 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 DGKDQ16760 1214 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 RRAGBQ5VZM2 374 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 KRT80Q6KB66 452 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 GSTA5Q7RTV2 222 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 ARPINQ7Z6K5 226 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 THEMISQ8N1K5 641 aaPredicted RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 MARVELD2Q8N4S9 558 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 B3GALT6Q96L58 329 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 SNX18Q96RF0 628 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 MYLK2Q9H1R3 596 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 KCNK9Q9NPC2 374 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 PAG1Q9NWQ8 432 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 APPL1Q9UKG1 709 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 NFS1Q9Y697 457 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 MAP3K19Q56UN5 1328 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 TLDC2A0PJX2 215 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 LGALS16A8MUM7 142 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 MAGEB2O15479 319 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 DNAJC6O75061 913 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 ABCB1P08183 1280 aaPredicted RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 TCF3P15923 654 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 ADAM17P78536 824 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 COASYQ13057 564 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 GNA13Q14344 377 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 KRT24Q2M2I5 525 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 ZC2HC1CQ53FD0 456 aaPredicted RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 CLVS2Q5SYC1 327 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 EFCAB2Q5VUJ9 269 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 POTEAQ6S8J7 498 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 C15orf52Q6ZUT6 534 aaKnown RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 ASCC1Q8N9N2 400 aaKnown RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 XXYLT1Q8NBI6 393 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 HM13Q8TCT9 377 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 HPS1Q92902 700 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 FMO2Q99518 471 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 MNTQ99583 582 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 DDX56Q9NY93 547 aaKnown RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 TBC1D14Q9P2M4 693 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 PRKAG3Q9UGI9 489 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 PTBP2Q9UKA9 531 aaKnown RBP4.37□□□□□ -1.71
NEDD4-201ENST00000338963 PODXLO00592 558 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 GNB5O14775 395 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 SRGAP2O75044 1071 aa4.37□□□□□ -1.71
NEDD4-201ENST00000338963 COBLO75128 1261 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms