RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 PTPN14Q15678 1187 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 FBXO47Q5MNV8 452 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 ZNF571Q7Z3V5 609 aaPredicted RBP15.82■□□□□ 0.12
CBX3-201ENST00000337620 ATRIPQ8WXE1 791 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 KIF12Q96FN5 646 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 APOBEC3GQ9HC16 384 aaKnown RBP15.82■□□□□ 0.12
CBX3-201ENST00000337620 LZTFL1Q9NQ48 299 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 PARP2Q9UGN5 583 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 RECQL4O94761 1208 aa15.81■□□□□ 0.12
CBX3-201ENST00000337620 HSPA8P11142 646 aaKnown RBP15.81■□□□□ 0.12
CBX3-201ENST00000337620 CKBP12277 381 aa15.81■□□□□ 0.12
CBX3-201ENST00000337620 PRKCIP41743 596 aa15.81■□□□□ 0.12
CBX3-201ENST00000337620 NOP14P78316 857 aaKnown RBP15.81■□□□□ 0.12
CBX3-201ENST00000337620 ASTE1Q2TB18 679 aaPredicted RBP15.81■□□□□ 0.12
CBX3-201ENST00000337620 CD302Q8IX05 232 aa15.81■□□□□ 0.12
CBX3-201ENST00000337620 TMEM130Q8N3G9 435 aa15.81■□□□□ 0.12
CBX3-201ENST00000337620 ARID3AQ99856 593 aa15.81■□□□□ 0.12
CBX3-201ENST00000337620 CXCL16Q9H2A7 254 aa15.81■□□□□ 0.12
CBX3-201ENST00000337620 PLEKHA5Q9HAU0 1116 aa15.81■□□□□ 0.12
CBX3-201ENST00000337620 ADAMTS1Q9UHI8 967 aa15.81■□□□□ 0.12
CBX3-201ENST00000337620 PADI3Q9ULW8 664 aa15.81■□□□□ 0.12
CBX3-201ENST00000337620 NUB1Q9Y5A7 615 aa15.81■□□□□ 0.12
CBX3-201ENST00000337620 PAK2Q13177 524 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 SGSM1Q2NKQ1 1148 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 ENOSF1Q7L5Y1 443 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 KIAA1328Q86T90 577 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 C1orf127Q8N9H9 656 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 SHC3Q92529 594 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 SNX27Q96L92 541 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 FAM81BQ96LP2 452 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 RNF39Q9H2S5 420 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 RNF19AQ9NV58 838 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 KLK14Q9P0G3 267 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 IPPQ9Y573 584 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 CITO14578 2027 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 GOLGA6L9A6NEM1 432 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 ZNF263O14978 683 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 ASS1P00966 412 aaKnown RBP15.8■□□□□ 0.12
CBX3-201ENST00000337620 TFRCP02786 760 aaKnown RBP15.8■□□□□ 0.12
CBX3-201ENST00000337620 ITGB3P05106 788 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 ZSCAN20P17040 1043 aaPredicted RBP15.8■□□□□ 0.12
CBX3-201ENST00000337620 CDK7P50613 346 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 LBX1P52954 281 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 LPIN1Q14693 890 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 FAM26DQ5JW98 314 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 SMG8Q8ND04 991 aaKnown RBP15.8■□□□□ 0.12
CBX3-201ENST00000337620 CHST12Q9NRB3 414 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 R3HCC1Q9Y3T6 440 aaKnown RBP15.8■□□□□ 0.12
CBX3-201ENST00000337620 C2CD2Q9Y426 696 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 UMODL1Q5DID0 1318 aa15.8■□□□□ 0.12
CBX3-201ENST00000337620 CYP26A1O43174 497 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 CAND2O75155 1236 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 KRT5P13647 590 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 TNNT1P13805 278 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 GUCY2FP51841 1108 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 CUL2Q13617 745 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 ZNF699Q32M78 642 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 ARHGAP29Q52LW3 1261 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 FBXO46Q6PJ61 603 aaPredicted RBP15.79■□□□□ 0.12
CBX3-201ENST00000337620 NYAP1Q6ZVC0 841 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 VPS36Q86VN1 386 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 FAM71AQ8IYT1 594 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 ZMAT2Q96NC0 199 aaKnown RBP15.79■□□□□ 0.12
CBX3-201ENST00000337620 ERVK-5Q9HDB9 667 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 DPP3Q9NY33 737 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 SIX4Q9UIU6 781 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 TFR2Q9UP52 801 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 PCDHB2Q9Y5E7 798 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 A0A087X0T9 212 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 LCA5LO95447 670 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 FAM228BP0C875 321 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 SLC18A3Q16572 532 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 GLRA4Q5JXX5 417 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 NT5DC4Q86YG4 428 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 SEZ6LQ9BYH1 1024 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 IFIH1Q9BYX4 1025 aaKnown RBP15.79■□□□□ 0.12
CBX3-201ENST00000337620 PCDHA13Q9Y5I0 950 aa15.79■□□□□ 0.12
CBX3-201ENST00000337620 SGPL1O95470 568 aa15.78■□□□□ 0.12
CBX3-201ENST00000337620 TBXAS1P24557 533 aaPredicted RBP15.78■□□□□ 0.12
CBX3-201ENST00000337620 MAGEA1P43355 309 aa15.78■□□□□ 0.12
CBX3-201ENST00000337620 ATN1P54259 1190 aaPredicted RBP15.78■□□□□ 0.12
CBX3-201ENST00000337620 ALKAL1Q6UXT8 129 aa15.78■□□□□ 0.12
CBX3-201ENST00000337620 U2AF1L4Q8WU68 220 aaKnown RBP15.78■□□□□ 0.12
CBX3-201ENST00000337620 ZNF333Q96JL9 665 aa15.78■□□□□ 0.12
CBX3-201ENST00000337620 FAM105AQ9NUU6 356 aa15.78■□□□□ 0.12
CBX3-201ENST00000337620 AGAP1Q9UPQ3 857 aa15.78■□□□□ 0.12
CBX3-201ENST00000337620 TRIP11Q15643 1979 aa15.78■□□□□ 0.12
CBX3-201ENST00000337620 ABL1P00519 1130 aa15.77■□□□□ 0.12
CBX3-201ENST00000337620 IBSPP21815 317 aaPredicted RBP15.77■□□□□ 0.12
CBX3-201ENST00000337620 POLR2BP30876 1174 aaKnown RBP15.77■□□□□ 0.12
CBX3-201ENST00000337620 FAM126BQ8IXS8 530 aa15.77■□□□□ 0.12
CBX3-201ENST00000337620 USP38Q8NB14 1042 aa15.77■□□□□ 0.12
CBX3-201ENST00000337620 XYLT2Q9H1B5 865 aa15.77■□□□□ 0.12
CBX3-201ENST00000337620 ACP6Q9NPH0 428 aa15.77■□□□□ 0.12
CBX3-201ENST00000337620 SEPT11Q9NVA2 429 aaKnown RBP15.77■□□□□ 0.12
CBX3-201ENST00000337620 CNTN3Q9P232 1028 aa15.77■□□□□ 0.12
CBX3-201ENST00000337620 NXF1Q9UBU9 619 aaKnown RBP15.77■□□□□ 0.12
CBX3-201ENST00000337620 ITGA11Q9UKX5 1188 aa15.77■□□□□ 0.12
CBX3-201ENST00000337620 DERAQ9Y315 318 aa15.77■□□□□ 0.12
CBX3-201ENST00000337620 PQBP1O60828 265 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms