RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CEP120Q8N960 986 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 SPIRE2Q8WWL2 714 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 BICD1Q96G01 975 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 CALML4Q96GE6 196 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 SHDQ96IW2 340 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 TMX3Q96JJ7 454 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 GOLGA2P5Q9HBQ8 144 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 PTPRHQ9HD43 1115 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 LARSQ9P2J5 1176 aaKnown RBP11.66□□□□□ -0.54
CAPN3-202ENST00000337571 ARHGAP28Q9P2N2 729 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 MTRRQ9UBK8 725 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 CDH7Q9ULB5 785 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 NUMBLQ9Y6R0 609 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 ZDBF2Q9HCK1 2354 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 PIEZO1Q92508 2521 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 PODXLO00592 558 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 ADAM12O43184 909 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 TOM1L1O75674 476 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 LRG1P02750 347 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 PLA2G4BP0C869 781 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 KCNE1P15382 129 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 PTPN2P17706 415 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 BRCC3P46736 316 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 ARPP19P56211 112 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 NTHL1P78549 312 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 HTR4Q13639 388 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 PABPC1LQ4VXU2 614 aaKnown RBP11.65□□□□□ -0.54
CAPN3-202ENST00000337571 HYIQ5T013 277 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 LARP1BQ659C4 914 aaKnown RBP11.65□□□□□ -0.54
CAPN3-202ENST00000337571 CWF19L1Q69YN2 538 aaKnown RBP11.65□□□□□ -0.54
CAPN3-202ENST00000337571 KCNK18Q7Z418 384 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 CCDC105Q8IYK2 499 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 DTWD2Q8NBA8 298 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 RASSF8Q8NHQ8 419 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 ZNF461Q8TAF7 563 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 GPR152Q8TDT2 470 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 FGF13Q92913 245 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 AK8Q96MA6 479 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 MMTAG2Q9BU76 263 aaKnown RBP11.65□□□□□ -0.54
CAPN3-202ENST00000337571 ANKFY1Q9P2R3 1169 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 MRPS23Q9Y3D9 190 aaKnown RBP11.65□□□□□ -0.54
CAPN3-202ENST00000337571 SIT1Q9Y3P8 196 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 VPS13AQ96RL7 3174 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 CITO14578 2027 aa11.65□□□□□ -0.54
CAPN3-202ENST00000337571 VWA8A3KMH1 1905 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 KRBA1A5PL33 1030 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 PROB1E7EW31 1015 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 SYN3O14994 580 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 SLC26A4O43511 780 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 KRT18P05783 430 aaKnown RBP11.64□□□□□ -0.55
CAPN3-202ENST00000337571 POU2F2P09086 479 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 SCP2P22307 547 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 PROZP22891 400 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 NBL1P41271 181 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 MAPK7Q13164 816 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 DHX8Q14562 1220 aaKnown RBP11.64□□□□□ -0.55
CAPN3-202ENST00000337571 NOLC1Q14978 699 aaKnown RBP eCLIP11.64□□□□□ -0.55
CAPN3-202ENST00000337571 ANGPT1Q15389 498 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 KYAT1Q16773 422 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 VARS2Q5ST30 1063 aaKnown RBP11.64□□□□□ -0.55
CAPN3-202ENST00000337571 PARM1Q6UWI2 310 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 ZPBP2Q6X784 338 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 TAS1R3Q7RTX0 852 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 ELMOD1Q8N336 334 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 APPL2Q8NEU8 664 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 ST13P5Q8NFI4 369 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-202ENST00000337571 NKD2Q969F2 451 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-202ENST00000337571 ZBTB45Q96K62 511 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-202ENST00000337571 SNX27Q96L92 541 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 ZMAT2Q96NC0 199 aaKnown RBP11.64□□□□□ -0.55
CAPN3-202ENST00000337571 PNMA5Q96PV4 448 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 TMEM121BQ9BXQ6 578 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-202ENST00000337571 TBC1D17Q9HA65 648 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 ARHGEF3Q9NR81 526 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 SLC2A4RGQ9NR83 387 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 CNTN3Q9P232 1028 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 KCNH3Q9ULD8 1083 aa11.64□□□□□ -0.55
CAPN3-202ENST00000337571 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-202ENST00000337571 BMP15O95972 392 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 CLTAP09496 248 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 MAPTP10636 758 aaKnown RBP11.63□□□□□ -0.55
CAPN3-202ENST00000337571 IGFBP6P24592 240 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-202ENST00000337571 MCM4P33991 863 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 SLC12A3P55017 1021 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 GPC5P78333 572 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 PFKPQ01813 784 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 SOX4Q06945 474 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-202ENST00000337571 CTXN3Q4LDR2 81 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 SEZ6Q53EL9 994 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 SPECC1Q5M775 1068 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 PHLDB3Q6NSJ2 640 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 CD300LGQ6UXG3 332 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 RSPO2Q6UXX9 243 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-202ENST00000337571 HAUS6Q7Z4H7 955 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 FRMD5Q7Z6J6 570 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 MYCT1Q8N699 235 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 C3orf58Q8NDZ4 430 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 TMEM161BQ8NDZ6 487 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 ITFG1Q8TB96 612 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 FGF14Q92915 247 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms