RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 PEX5P50542 639 aa10.36□□□□□ -0.75
MSL3-202ENST00000337339 STAT5BP51692 787 aa10.36□□□□□ -0.75
MSL3-202ENST00000337339 LRIG3Q6UXM1 1119 aa10.36□□□□□ -0.75
MSL3-202ENST00000337339 RHPN2Q8IUC4 686 aa10.36□□□□□ -0.75
MSL3-202ENST00000337339 EFCAB13Q8IY85 973 aa10.36□□□□□ -0.75
MSL3-202ENST00000337339 RNF149Q8NC42 400 aa10.36□□□□□ -0.75
MSL3-202ENST00000337339 TRAPPC12Q8WVT3 735 aa10.36□□□□□ -0.75
MSL3-202ENST00000337339 VTI1AQ96AJ9 217 aa10.36□□□□□ -0.75
MSL3-202ENST00000337339 RPS6KC1Q96S38 1066 aa10.36□□□□□ -0.75
MSL3-202ENST00000337339 INTS9Q9NV88 658 aaKnown RBP10.36□□□□□ -0.75
MSL3-202ENST00000337339 ZNF148Q9UQR1 794 aa10.36□□□□□ -0.75
MSL3-202ENST00000337339 SIPA1L1O43166 1804 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 A6NNZ2 444 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 H0YGN5 161 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 PIK3R2O00459 728 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 GGPS1O95749 300 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 SUPT20HL2P0C7V6 817 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 ATF2P15336 505 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 GLRA2P23416 452 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 NOP14P78316 857 aaKnown RBP10.35□□□□□ -0.75
MSL3-202ENST00000337339 NCOA4Q13772 614 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 CLEC16AQ2KHT3 1053 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 TUBB8Q3ZCM7 444 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 SUPT20HL1Q3ZLR7 823 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 PACS2Q86VP3 889 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 MCOLN2Q8IZK6 566 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 RBBP8NLQ8NC74 664 aaPredicted RBP10.35□□□□□ -0.75
MSL3-202ENST00000337339 PRPF31Q8WWY3 499 aaKnown RBP10.35□□□□□ -0.75
MSL3-202ENST00000337339 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.35□□□□□ -0.75
MSL3-202ENST00000337339 TIPINQ9BVW5 301 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 UVRAGQ9P2Y5 699 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 PGAP2Q9UHJ9 254 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 PCDHA3Q9Y5H8 950 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 NFS1Q9Y697 457 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 PTPRJQ12913 1337 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 COL4A5P29400 1685 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 TTLL13PA6NNM8 815 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 OATP04181 439 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 PSMC4P43686 418 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 MNAT1P51948 309 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 R3HDM1Q15032 1099 aaKnown RBP10.35□□□□□ -0.75
MSL3-202ENST00000337339 ZKSCAN8Q15776 578 aaPredicted RBP10.35□□□□□ -0.75
MSL3-202ENST00000337339 QPCTQ16769 361 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 C12orf56Q8IXR9 622 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.35□□□□□ -0.75
MSL3-202ENST00000337339 GDAP1Q8TB36 358 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 MTMR12Q9C0I1 747 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 ANAPC5Q9UJX4 755 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 NRXN2Q9P2S2 1712 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 GOLGA8MH3BSY2 632 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 ZBTB48P10074 688 aaPredicted RBP10.35□□□□□ -0.75
MSL3-202ENST00000337339 HSPA6P17066 643 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 BRD2P25440 801 aaKnown RBP10.35□□□□□ -0.75
MSL3-202ENST00000337339 CETN2P41208 172 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 POU5F1Q01860 360 aaKnown RBP10.35□□□□□ -0.75
MSL3-202ENST00000337339 TREML2Q5T2D2 321 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 CYP4A22Q5TCH4 519 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 TAS1R3Q7RTX0 852 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 CD302Q8IX05 232 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 TMC2Q8TDI7 906 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 MFSD14AQ96MC6 490 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 PRMT1Q99873 361 aaKnown RBP10.35□□□□□ -0.75
MSL3-202ENST00000337339 NRBP2Q9NSY0 501 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 PARP2Q9UGN5 583 aa10.35□□□□□ -0.75
MSL3-202ENST00000337339 R3HDM2Q9Y2K5 976 aaKnown RBP10.35□□□□□ -0.75
MSL3-202ENST00000337339 FOCADQ5VW36 1801 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 SPDYE16A6NNV3 312 aaPredicted RBP10.34□□□□□ -0.75
MSL3-202ENST00000337339 MAFGO15525 162 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 FAM107AO95990 144 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 CST3P01034 146 aaPredicted RBP10.34□□□□□ -0.75
MSL3-202ENST00000337339 GTF2H1P32780 548 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 TCF7P36402 384 aaPredicted RBP10.34□□□□□ -0.75
MSL3-202ENST00000337339 RPL7AP62424 266 aaKnown RBP10.34□□□□□ -0.75
MSL3-202ENST00000337339 CUL2Q13617 745 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 SYCP2LQ5T4T6 812 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 GKAP1Q5VSY0 366 aaPredicted RBP10.34□□□□□ -0.75
MSL3-202ENST00000337339 ABHD15Q6UXT9 468 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 CACNA2D3Q8IZS8 1091 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 SPIRE2Q8WWL2 714 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 THOC1Q96FV9 657 aaKnown RBP10.34□□□□□ -0.75
MSL3-202ENST00000337339 ELAC2Q9BQ52 826 aaKnown RBP10.34□□□□□ -0.75
MSL3-202ENST00000337339 CTNNAL1Q9UBT7 734 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 NUB1Q9Y5A7 615 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 CSADQ9Y600 493 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 MEFVO15553 781 aaPredicted RBP10.34□□□□□ -0.75
MSL3-202ENST00000337339 TMEM191BP0C7N4 346 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 ITGA8P53708 1063 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 EIF3BP55884 814 aaKnown RBP10.34□□□□□ -0.75
MSL3-202ENST00000337339 BPIFB4P59827 614 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 SMTNL2Q2TAL5 461 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 ZDHHC24Q6UX98 284 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 MOB2Q70IA6 237 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 C10orf88Q9H8K7 445 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 ZWILCHQ9H900 591 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 ELP3Q9H9T3 547 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 ZDHHC18Q9NUE0 388 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 TMEM51Q9NW97 253 aa10.34□□□□□ -0.75
MSL3-202ENST00000337339 MAP3K20Q9NYL2 800 aaKnown RBP10.34□□□□□ -0.75
MSL3-202ENST00000337339 ZNF541Q9H0D2 1346 aa10.33□□□□□ -0.76
MSL3-202ENST00000337339 LRRD1A4D1F6 860 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms