RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 SMCHD1A6NHR9 2005 aa21.95■■□□□ 1.1
SPNS1-203ENST00000334536 P4HBP07237 508 aaKnown RBP21.95■■□□□ 1.1
SPNS1-203ENST00000334536 SNRPFP62306 86 aaKnown RBP21.95■■□□□ 1.1
SPNS1-203ENST00000334536 RSBN1LQ6PCB5 846 aaPredicted RBP21.95■■□□□ 1.1
SPNS1-203ENST00000334536 MIER3Q7Z3K6 550 aa21.95■■□□□ 1.1
SPNS1-203ENST00000334536 RHOT2Q8IXI1 618 aa21.95■■□□□ 1.1
SPNS1-203ENST00000334536 GRAMD1AQ96CP6 724 aa21.95■■□□□ 1.1
SPNS1-203ENST00000334536 CCDC97Q96F63 343 aaPredicted RBP21.95■■□□□ 1.1
SPNS1-203ENST00000334536 ACCSQ96QU6 501 aa21.95■■□□□ 1.1
SPNS1-203ENST00000334536 AGPAT1Q99943 283 aa21.95■■□□□ 1.1
SPNS1-203ENST00000334536 DCLRE1BQ9H816 532 aa21.95■■□□□ 1.1
SPNS1-203ENST00000334536 PREBQ9HCU5 417 aa21.95■■□□□ 1.1
SPNS1-203ENST00000334536 STK32BQ9NY57 414 aa21.95■■□□□ 1.1
SPNS1-203ENST00000334536 MAPK13O15264 365 aa21.94■■□□□ 1.1
SPNS1-203ENST00000334536 RGS16O15492 202 aaPredicted RBP21.94■■□□□ 1.1
SPNS1-203ENST00000334536 INHBCP55103 352 aa21.94■■□□□ 1.1
SPNS1-203ENST00000334536 DLGAP5Q15398 846 aa21.94■■□□□ 1.1
SPNS1-203ENST00000334536 OSGEPQ9NPF4 335 aa21.94■■□□□ 1.1
SPNS1-203ENST00000334536 UTP11Q9Y3A2 253 aaKnown RBP21.94■■□□□ 1.1
SPNS1-203ENST00000334536 FAM200BP0CF97 657 aa21.94■■□□□ 1.1
SPNS1-203ENST00000334536 ITGA4P13612 1032 aa21.94■■□□□ 1.1
SPNS1-203ENST00000334536 CACNA2D1P54289 1103 aa21.94■■□□□ 1.1
SPNS1-203ENST00000334536 POU5F1Q01860 360 aaKnown RBP21.94■■□□□ 1.1
SPNS1-203ENST00000334536 LSAMPQ13449 338 aa21.94■■□□□ 1.1
SPNS1-203ENST00000334536 TNFAIP8L3Q5GJ75 292 aa21.94■■□□□ 1.1
SPNS1-203ENST00000334536 PHLDB3Q6NSJ2 640 aa21.94■■□□□ 1.1
SPNS1-203ENST00000334536 NR1H4Q96RI1 486 aaPredicted RBP21.94■■□□□ 1.1
SPNS1-203ENST00000334536 NUDCD1Q96RS6 583 aa21.94■■□□□ 1.1
SPNS1-203ENST00000334536 MAF1Q9H063 256 aa21.94■■□□□ 1.1
SPNS1-203ENST00000334536 PABPC3Q9H361 631 aaKnown RBP21.94■■□□□ 1.1
SPNS1-203ENST00000334536 ZMYND8Q9ULU4 1186 aaPredicted RBP21.94■■□□□ 1.1
SPNS1-203ENST00000334536 USP20Q9Y2K6 914 aa21.94■■□□□ 1.1
SPNS1-203ENST00000334536 CNTNAP1P78357 1384 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 PFASO15067 1338 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 K7ENM7 598 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 PMM2O15305 246 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 LYPLA2O95372 231 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 OATP04181 439 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 CHRNA5P30532 468 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 CNGA2Q16280 664 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 SPDYE2Q495Y8 402 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 SPDYAQ5MJ70 313 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 DEFB132Q7Z7B7 95 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 FMO2Q99518 471 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 ETNK1Q9HBU6 452 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 IL1RAPL1Q9NZN1 696 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 AMACRQ9UHK6 382 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 PPP1R9AQ9ULJ8 1098 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 PSME4Q14997 1843 aa21.93■■□□□ 1.1
SPNS1-203ENST00000334536 SIGLEC16A6NMB1 481 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 FOXN3O00409 490 aaPredicted RBP21.92■■□□□ 1.1
SPNS1-203ENST00000334536 TJP3O95049 919 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 MYBL1P10243 752 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 PTGER2P43116 358 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 VAMP7P51809 220 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 PTENP60484 403 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 PTPROQ16827 1216 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 ARHGAP44Q17R89 818 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 FITM2Q8N6M3 262 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 SMC1BQ8NDV3 1235 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 UTP4Q969X6 686 aaKnown RBP21.92■■□□□ 1.1
SPNS1-203ENST00000334536 ST6GALNAC4Q9H4F1 302 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 CLRN2A0PK11 232 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 FAM187AA6NFU0 413 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 FGGP02679 453 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 SHBGP04278 402 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 ICAM1P05362 532 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 KCNA3P22001 575 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 BAG6P46379 1132 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 MCCD1P59942 119 aaPredicted RBP21.92■■□□□ 1.1
SPNS1-203ENST00000334536 GHRHRQ02643 423 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 DENND2CQ68D51 928 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 C11orf63Q6NUN7 778 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 MAEAQ7L5Y9 396 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 DDX42Q86XP3 938 aaKnown RBP eCLIP21.92■■□□□ 1.1
SPNS1-203ENST00000334536 GATA6Q92908 595 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 GMLQ99445 158 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 RMI1Q9H9A7 625 aa21.92■■□□□ 1.1
SPNS1-203ENST00000334536 IGSF9BQ9UPX0 1349 aa21.91■■□□□ 1.1
SPNS1-203ENST00000334536 EIF4E1BA6NMX2 242 aaKnown RBP21.91■■□□□ 1.1
SPNS1-203ENST00000334536 MIF4GDA9UHW6 222 aaKnown RBP21.91■■□□□ 1.1
SPNS1-203ENST00000334536 DAPK3O43293 454 aa21.91■■□□□ 1.1
SPNS1-203ENST00000334536 PLS3P13797 630 aa21.91■■□□□ 1.1
SPNS1-203ENST00000334536 HSPA6P17066 643 aa21.91■■□□□ 1.1
SPNS1-203ENST00000334536 ITGB5P18084 799 aa21.91■■□□□ 1.1
SPNS1-203ENST00000334536 ABCB4P21439 1286 aa21.91■■□□□ 1.1
SPNS1-203ENST00000334536 FLT3P36888 993 aa21.91■■□□□ 1.1
SPNS1-203ENST00000334536 CAP2P40123 477 aa21.91■■□□□ 1.1
SPNS1-203ENST00000334536 EPC2Q52LR7 807 aa21.91■■□□□ 1.1
SPNS1-203ENST00000334536 MCF2L2Q86YR7 1114 aa21.91■■□□□ 1.1
SPNS1-203ENST00000334536 LRRC43Q8N309 656 aa21.91■■□□□ 1.1
SPNS1-203ENST00000334536 IRGQQ8WZA9 623 aa21.91■■□□□ 1.1
SPNS1-203ENST00000334536 ARHGEF26Q96DR7 871 aa21.91■■□□□ 1.1
SPNS1-203ENST00000334536 KLHL14Q9P2G3 628 aa21.91■■□□□ 1.1
SPNS1-203ENST00000334536 EMSYQ7Z589 1322 aa21.91■■□□□ 1.1
SPNS1-203ENST00000334536 TTI1O43156 1089 aa21.9■■□□□ 1.1
SPNS1-203ENST00000334536 RASSF2P50749 326 aa21.9■■□□□ 1.1
SPNS1-203ENST00000334536 SAMD3Q8N6K7 520 aa21.9■■□□□ 1.1
SPNS1-203ENST00000334536 SLC17A8Q8NDX2 589 aa21.9■■□□□ 1.1
SPNS1-203ENST00000334536 OLFM3Q96PB7 478 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms