RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 TMEM120BA0PK00 339 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 ZNF197O14709 1029 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 NR3C1P04150 777 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 XRCC4Q13426 336 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 PIGHQ14442 188 aaPredicted RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 PLEKHA7Q6IQ23 1121 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 NLRP10Q86W26 655 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 KIAA0825Q8IV33 1275 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 SCUBE1Q8IWY4 988 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 NMRK1Q9NWW6 199 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 SLC9A2Q9UBY0 812 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 SAP30BPQ9UHR5 308 aaKnown RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 LRRN2O75325 713 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 POLBP06746 335 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 DYNLT1P63172 113 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 PTH1RQ03431 593 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 NAB1Q13506 487 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 MZT2BQ6NZ67 158 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 TRAPPC11Q7Z392 1133 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 FMR1NBQ8N0W7 255 aaPredicted RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 CYP4Z2PQ8N1L4 340 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 CNDP1Q96KN2 507 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 MLXIPQ9HAP2 919 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 ADAM22Q9P0K1 906 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 MAPRE3Q9UPY8 281 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 WDR91A4D1P6 747 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 LRRIQ4A6NIV6 560 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 TSPAN9O75954 239 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 BCL10O95999 233 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 AKAP5P24588 427 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SPRP35270 261 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 DLG4P78352 724 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 COG2Q14746 738 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 CCDC157Q569K6 752 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SWT1Q5T5J6 900 aaKnown RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 STARD8Q92502 1023 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 RBM15Q96T37 977 aaKnown RBP eCLIP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 CARD14Q9BXL6 1004 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 FGAP02671 866 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SDC4P31431 198 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SP4Q02446 784 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 MAD2L1Q13257 205 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 TOP3AQ13472 1001 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 ANO4Q32M45 955 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 MICU2Q8IYU8 434 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 MYCBPAPQ8TBZ2 947 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 PI4K2BQ8TCG2 481 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 MAGEC3Q8TD91 643 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 RASSF5Q8WWW0 418 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SLC10A4Q96EP9 437 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 BDH2Q9BUT1 245 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 DHX36Q9H2U1 1008 aaKnown RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SAGE2PA6NJ88 616 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 PDXKO00764 312 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 GFPT1Q06210 699 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 CTTNQ14247 550 aaKnown RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 LBRQ14739 615 aaKnown RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 CCNI2Q6ZMN8 369 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 BARGINQ6ZT62 677 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 CYP4Z1Q86W10 505 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 XXYLT1Q8NBI6 393 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 EFCAB1Q9HAE3 211 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 CCDC59Q9P031 241 aaKnown RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 LRRC7Q96NW7 1537 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 PNMA6FA0A0J9YX94 578 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 F8VZ95 297 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 FDFT1P37268 417 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 ARSEP51690 589 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 RAD23AP54725 363 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 C21orf59P57076 290 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 Q4G0T1 1027 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 EAPPQ56P03 285 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 BNC2Q6ZN30 1099 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 ZNF554Q86TJ5 538 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 PDPRQ8NCN5 879 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 PLGRKTQ9HBL7 147 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 CNOT8Q9UFF9 292 aaKnown RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 ATP6V1HQ9UI12 483 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SEC24DO94855 1032 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 PLA2G4BP0C869 781 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 ZAP70P43403 619 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 ITGA9Q13797 1035 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 NAIF1Q69YI7 327 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 PRR23BQ6ZRT6 265 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 PPIL6Q8IXY8 311 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 OTUD5Q96G74 571 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SERHL2Q9H4I8 314 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SERHLQ9NQF3 203 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 PCDHA1Q9Y5I3 950 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 PCCAP05165 728 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 KCNA2P16389 499 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 CYP4A11Q02928 519 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 CYP4A22Q5TCH4 519 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 CACHD1Q5VU97 1274 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 THOC7Q6I9Y2 204 aaKnown RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 ZBTB9Q96C00 473 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 FHDC1Q9C0D6 1143 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 VTI1BQ9UEU0 232 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SEPT9Q9UHD8 586 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms