RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 PIGOQ8TEQ8 1089 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 RAD54LQ92698 747 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 SNX21Q969T3 373 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 FAXDC2Q96IV6 333 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 KMT5AQ9NQR1 393 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 DDX19AQ9NUU7 478 aaKnown RBP6.98□□□□□ -1.29
USP16-201ENST00000334352 LRRIQ4A6NIV6 560 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 ARNTLO00327 626 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 PODXLO00592 558 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 OGTO15294 1046 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 GPR17Q13304 367 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 PTPAQ15257 358 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 EEF1DP3Q658K8 133 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 LLGL2Q6P1M3 1020 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 ZC3H14Q6PJT7 736 aaKnown RBP6.98□□□□□ -1.29
USP16-201ENST00000334352 FAM184AQ8NB25 1140 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 PJA1Q8NG27 643 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 SNX29Q8TEQ0 813 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 RIN2Q8WYP3 895 aaPredicted RBP6.98□□□□□ -1.29
USP16-201ENST00000334352 TRMT2BQ96GJ1 504 aaKnown RBP6.98□□□□□ -1.29
USP16-201ENST00000334352 RPGRIP1Q96KN7 1286 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 EPC1Q9H2F5 836 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 KIF9Q9HAQ2 790 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 GJB4Q9NTQ9 266 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 LARSQ9P2J5 1176 aaKnown RBP6.98□□□□□ -1.29
USP16-201ENST00000334352 KIAA1024Q9UPX6 916 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 PCDHB6Q9Y5E3 794 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 SRPRBQ9Y5M8 271 aaKnown RBP6.98□□□□□ -1.29
USP16-201ENST00000334352 DOCK8Q8NF50 2099 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 RANBP2P49792 3224 aaKnown RBP6.98□□□□□ -1.29
USP16-201ENST00000334352 PNPLA4P41247 253 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 FCHO2Q0JRZ9 810 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 SURF1Q15526 300 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 ZNF174Q15697 407 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 MLF2Q15773 248 aaPredicted RBP6.98□□□□□ -1.29
USP16-201ENST00000334352 CLUL1Q15846 466 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 SLC10A6Q3KNW5 377 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 ZNF280DQ6N043 979 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 CCDC83Q8IWF9 413 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 ZBTB44Q8NCP5 570 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 DDX12PQ92771 950 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 PYM1Q9BRP8 204 aaKnown RBP6.98□□□□□ -1.29
USP16-201ENST00000334352 RUSC1Q9BVN2 902 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 ZCWPW1Q9H0M4 648 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 BHMT2Q9H2M3 363 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 ZSCAN16Q9H4T2 348 aaPredicted RBP6.98□□□□□ -1.29
USP16-201ENST00000334352 BLOC1S4Q9NUP1 217 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 GDAP2Q9NXN4 497 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 MRPS17Q9Y2R5 130 aaKnown RBP6.98□□□□□ -1.29
USP16-201ENST00000334352 GREB1Q4ZG55 1949 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 SZT2Q5T011 3432 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 NCANO14594 1321 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 WDR27A2RRH5 827 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 SHISA7A6NL88 538 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 SEC24BO95487 1268 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 LDHAP00338 332 aaKnown RBP6.97□□□□□ -1.29
USP16-201ENST00000334352 PLA2G4BP0C869 781 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 NASPP49321 788 aaPredicted RBP6.97□□□□□ -1.29
USP16-201ENST00000334352 PLCB2Q00722 1185 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 STRN3Q13033 797 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 FZD5Q13467 585 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 NFIL3Q16649 462 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 LIN9Q5TKA1 542 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 DPH6Q7L8W6 267 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 TMC8Q8IU68 726 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 TMEM86AQ8N2M4 240 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 LRRC52Q8N7C0 313 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 ZFP42Q96MM3 310 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 PPP1R16BQ96T49 567 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 TBX20Q9UMR3 447 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 INPP5FQ9Y2H2 1132 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 NT5C1B-RDH14C9J2C7 533 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 EIF3DO15371 548 aaKnown RBP eCLIP6.97□□□□□ -1.29
USP16-201ENST00000334352 NCAM2O15394 837 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 MOSPD3O75425 235 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 NOL4O94818 638 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 DDIT3P35638 169 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 NRLP54845 237 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 RBM10P98175 930 aaKnown RBP6.97□□□□□ -1.29
USP16-201ENST00000334352 DGKKQ5KSL6 1271 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 L1TD1Q5T7N2 865 aaKnown RBP6.97□□□□□ -1.29
USP16-201ENST00000334352 LOXL4Q96JB6 756 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 TMX3Q96JJ7 454 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 PKMYT1Q99640 499 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 GPRC5CQ9NQ84 441 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 ARHGEF3Q9NR81 526 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 DNMT3BQ9UBC3 853 aaKnown RBP6.97□□□□□ -1.29
USP16-201ENST00000334352 PARP2Q9UGN5 583 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 LIMD1Q9UGP4 676 aa6.97□□□□□ -1.29
USP16-201ENST00000334352 KANSL1LA0AUZ9 987 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 KRBA1A5PL33 1030 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 CHURC1-FNTBB4DL54 471 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 CHADO15335 359 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 PPP6R2O75170 966 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 CSDE1O75534 798 aaKnown RBP6.96□□□□□ -1.29
USP16-201ENST00000334352 C8AP07357 584 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 PBX3P40426 434 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 MAGEA11P43364 429 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 LIMK1P53667 647 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 BMT2Q1RMZ1 405 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms