RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 LLGL1Q15334 1064 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 TAF1BQ53T94 588 aaPredicted RBP17.29■□□□□ 0.36
UPK3B-202ENST00000334348 C15orf52Q6ZUT6 534 aaKnown RBP17.29■□□□□ 0.36
UPK3B-202ENST00000334348 NOP9Q86U38 636 aaKnown RBP17.29■□□□□ 0.36
UPK3B-202ENST00000334348 ATG4AQ8WYN0 398 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 TRAPPC9Q96Q05 1148 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 P2RX7Q99572 595 aaKnown RBP17.29■□□□□ 0.36
UPK3B-202ENST00000334348 SMG5Q9UPR3 1016 aaKnown RBP17.29■□□□□ 0.36
UPK3B-202ENST00000334348 MSH4O15457 936 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 P4HA2O15460 535 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 SPAG7O75391 227 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 OCRLQ01968 901 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 NFIXQ14938 502 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 KHDC1Q4VXA5 237 aaKnown RBP17.29■□□□□ 0.36
UPK3B-202ENST00000334348 SLF2Q8IX21 1173 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 KIFAP3Q92845 792 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 ZNF653Q96CK0 615 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 C9orf72Q96LT7 481 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 CYLDQ9NQC7 956 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 SCOCQ9UIL1 159 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 ZFP69BQ9UJL9 534 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 NEU2Q9Y3R4 380 aa17.29■□□□□ 0.36
UPK3B-202ENST00000334348 GAKO14976 1311 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 EML1O00423 815 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 SKIP12755 728 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 MYBPC2Q14324 1141 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 RBM26Q5T8P6 1007 aaKnown RBP17.28■□□□□ 0.36
UPK3B-202ENST00000334348 RNF220Q5VTB9 566 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 TDRPQ86YL5 185 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 FAM178BQ8IXR5 827 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 UCMAQ8WVF2 138 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 SETDB2Q96T68 719 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 EMSYQ7Z589 1322 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 C2CD2LO14523 706 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 CIITAP33076 1130 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 EPC2Q52LR7 807 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 CEP128Q6ZU80 1094 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 PRUNE1Q86TP1 453 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 KIAA0825Q8IV33 1275 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 FAM71AQ8IYT1 594 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 RDH13Q8NBN7 331 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 HSD17B14Q9BPX1 270 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 GRID1Q9ULK0 1009 aa17.28■□□□□ 0.36
UPK3B-202ENST00000334348 MYBL1P10243 752 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 RRM1P23921 792 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 GCAP28676 217 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 SREBF1P36956 1147 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 FMO1Q01740 532 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 CDR2Q01850 454 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 CENPCQ03188 943 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 CCDC6Q16204 474 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 SNX30Q5VWJ9 437 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 NLRP9Q7RTR0 991 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 ZNF398Q8TD17 642 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 MIPEPQ99797 713 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 FOXP3Q9BZS1 431 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 TRIM4Q9C037 500 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 TRABDQ9H4I3 376 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 SENP1Q9P0U3 644 aa17.27■□□□□ 0.36
UPK3B-202ENST00000334348 MAGEA4P43358 317 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 DLG4P78352 724 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 CTC1Q2NKJ3 1217 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 TPTE2Q6XPS3 522 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 CCDC89Q8N998 374 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 CFAP57Q96MR6 1250 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 TUFT1Q9NNX1 390 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 CD209Q9NNX6 404 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 EXOC1LA0A1B0GW35 172 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 GSTTP1A0A1W2PQM5 241 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 VPS41P49754 854 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 PPP3CAQ08209 521 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 RCN2Q14257 317 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 RASA3Q14644 834 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 GRIPAP1Q4V328 841 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 IZUMO3Q5VZ72 239 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 RFWD3Q6PCD5 774 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 NSMFQ6X4W1 530 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 OTOAQ7RTW8 1153 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 CLNKQ7Z7G1 428 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 SLC51AQ86UW1 340 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 LARGE2Q8N3Y3 721 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 BICD1Q96G01 975 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 CADM1Q9BY67 442 aaKnown RBP17.26■□□□□ 0.35
UPK3B-202ENST00000334348 KIAA1586Q9HCI6 787 aa17.26■□□□□ 0.35
UPK3B-202ENST00000334348 FOSP01100 380 aaPredicted RBP17.25■□□□□ 0.35
UPK3B-202ENST00000334348 VAMP7P51809 220 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 ZRSR2Q15696 482 aaKnown RBP17.25■□□□□ 0.35
UPK3B-202ENST00000334348 SCG3Q8WXD2 468 aaKnown RBP17.25■□□□□ 0.35
UPK3B-202ENST00000334348 KAT5Q92993 513 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 GPR101Q96P66 508 aaPredicted RBP17.25■□□□□ 0.35
UPK3B-202ENST00000334348 SMC6Q96SB8 1091 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 HERPUD2Q9BSE4 406 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.25■□□□□ 0.35
UPK3B-202ENST00000334348 CCDC22O60826 627 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 ATP9AO75110 1047 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 SLITRK3O94933 977 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 ZWINTO95229 277 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 MMP10P09238 476 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 RPA3P35244 121 aaPredicted RBP17.25■□□□□ 0.35
UPK3B-202ENST00000334348 SESN3P58005 492 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms