RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 RNF19AQ9NV58 838 aa25.06■■□□□ 1.6
TSEN54-201ENST00000333213 SIX4Q9UIU6 781 aa25.06■■□□□ 1.6
TSEN54-201ENST00000333213 FOXN3O00409 490 aaPredicted RBP25.06■■□□□ 1.6
TSEN54-201ENST00000333213 TMEM191BP0C7N4 346 aa25.06■■□□□ 1.6
TSEN54-201ENST00000333213 RFX1P22670 979 aa25.06■■□□□ 1.6
TSEN54-201ENST00000333213 APBB1IPQ7Z5R6 666 aaPredicted RBP25.06■■□□□ 1.6
TSEN54-201ENST00000333213 C1orf127Q8N9H9 656 aa25.06■■□□□ 1.6
TSEN54-201ENST00000333213 NT5C1BQ96P26 610 aa25.06■■□□□ 1.6
TSEN54-201ENST00000333213 SEZ6LQ9BYH1 1024 aa25.06■■□□□ 1.6
TSEN54-201ENST00000333213 TRMT1Q9NXH9 659 aaKnown RBP25.06■■□□□ 1.6
TSEN54-201ENST00000333213 TRIP11Q15643 1979 aa25.05■■□□□ 1.6
TSEN54-201ENST00000333213 ZC3H11AO75152 810 aaKnown RBP eCLIP25.05■■□□□ 1.6
TSEN54-201ENST00000333213 PTPN14Q15678 1187 aa25.05■■□□□ 1.6
TSEN54-201ENST00000333213 CCAR2Q8N163 923 aaKnown RBP25.05■■□□□ 1.6
TSEN54-201ENST00000333213 ARID3AQ99856 593 aa25.05■■□□□ 1.6
TSEN54-201ENST00000333213 CHST12Q9NRB3 414 aa25.05■■□□□ 1.6
TSEN54-201ENST00000333213 MEIS3P2A8K0S8 358 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 PHACTR2O75167 634 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 SOX5P35711 763 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 MYL6P60660 151 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 PAK2Q13177 524 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 ANKRD36BP1Q96IX9 119 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 PLEKHA5Q9HAU0 1116 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 DAAM1Q9Y4D1 1078 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 NUB1Q9Y5A7 615 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 PCDHB2Q9Y5E7 798 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 ADGRG1Q9Y653 693 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 EPN1Q9Y6I3 576 aaPredicted RBP25.04■■□□□ 1.6
TSEN54-201ENST00000333213 UMODL1Q5DID0 1318 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 GFPT2O94808 682 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 COL6A1P12109 1028 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 EIF4A3P38919 411 aaKnown RBP25.04■■□□□ 1.6
TSEN54-201ENST00000333213 GJA8P48165 433 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 GUCY2FP51841 1108 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 ASIC2Q16515 512 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 ASTE1Q2TB18 679 aaPredicted RBP25.04■■□□□ 1.6
TSEN54-201ENST00000333213 SLC39A5Q6ZMH5 540 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 ACRBPQ8NEB7 543 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 XYLT2Q9H1B5 865 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 FAM105AQ9NUU6 356 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 KLK14Q9P0G3 267 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 REXO2Q9Y3B8 237 aaKnown RBP25.04■■□□□ 1.6
TSEN54-201ENST00000333213 C2CD2Q9Y426 696 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 SQORQ9Y6N5 450 aa25.04■■□□□ 1.6
TSEN54-201ENST00000333213 A0A0U1RQJ8 604 aa25.03■■□□□ 1.6
TSEN54-201ENST00000333213 EVI5O60447 810 aa25.03■■□□□ 1.6
TSEN54-201ENST00000333213 PQBP1O60828 265 aaKnown RBP25.03■■□□□ 1.6
TSEN54-201ENST00000333213 NDUFA10O95299 355 aa25.03■■□□□ 1.6
TSEN54-201ENST00000333213 ASS1P00966 412 aaKnown RBP25.03■■□□□ 1.6
TSEN54-201ENST00000333213 SERPING1P05155 500 aa25.03■■□□□ 1.6
TSEN54-201ENST00000333213 STAT1P42224 750 aa25.03■■□□□ 1.6
TSEN54-201ENST00000333213 DSC3Q14574 896 aa25.03■■□□□ 1.6
TSEN54-201ENST00000333213 GPNMBQ14956 572 aa25.03■■□□□ 1.6
TSEN54-201ENST00000333213 TMEM132DQ14C87 1099 aa25.03■■□□□ 1.6
TSEN54-201ENST00000333213 ZBTB6Q15916 424 aa25.03■■□□□ 1.6
TSEN54-201ENST00000333213 ATRIPQ8WXE1 791 aa25.03■■□□□ 1.6
TSEN54-201ENST00000333213 HAUS4Q9H6D7 363 aa25.03■■□□□ 1.6
TSEN54-201ENST00000333213 CNTN3Q9P232 1028 aa25.03■■□□□ 1.6
TSEN54-201ENST00000333213 RALGAPA2Q2PPJ7 1873 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 TNNC2P02585 160 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 NOP14P78316 857 aaKnown RBP25.02■■□□□ 1.6
TSEN54-201ENST00000333213 GCNT1Q02742 428 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 GLRA4Q5JXX5 417 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 CD302Q8IX05 232 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 CAGE1Q8TC20 777 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 PPP2R2CQ9Y2T4 447 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 ZNF263O14978 683 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 PRKCIP41743 596 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 YARSP54577 528 aaKnown RBP25.02■■□□□ 1.6
TSEN54-201ENST00000333213 PTK2Q05397 1052 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 MAPK8IP2Q13387 824 aaPredicted RBP25.02■■□□□ 1.6
TSEN54-201ENST00000333213 XKR4Q5GH76 650 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 WDR44Q5JSH3 913 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 USP38Q8NB14 1042 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 SHC3Q92529 594 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 KIF12Q96FN5 646 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 C1orf112Q9NSG2 853 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 PARP2Q9UGN5 583 aa25.02■■□□□ 1.6
TSEN54-201ENST00000333213 ITGB3P05106 788 aa25.01■■□□□ 1.59
TSEN54-201ENST00000333213 MFAP3P55082 362 aa25.01■■□□□ 1.59
TSEN54-201ENST00000333213 KLHL30Q0D2K2 578 aa25.01■■□□□ 1.59
TSEN54-201ENST00000333213 LRRC8DQ7L1W4 858 aa25.01■■□□□ 1.59
TSEN54-201ENST00000333213 ANKRD33Q7Z3H0 272 aa25.01■■□□□ 1.59
TSEN54-201ENST00000333213 ZNF571Q7Z3V5 609 aaPredicted RBP25.01■■□□□ 1.59
TSEN54-201ENST00000333213 REXO1L1PQ8IX06 675 aa25.01■■□□□ 1.59
TSEN54-201ENST00000333213 CCDC170Q8IYT3 715 aa25.01■■□□□ 1.59
TSEN54-201ENST00000333213 OLIG1Q8TAK6 271 aa25.01■■□□□ 1.59
TSEN54-201ENST00000333213 PKNOX2Q96KN3 472 aa25.01■■□□□ 1.59
TSEN54-201ENST00000333213 CCDC42Q96M95 316 aa25.01■■□□□ 1.59
TSEN54-201ENST00000333213 SSU72P8A0A1W2PR75 194 aa25■■□□□ 1.59
TSEN54-201ENST00000333213 TDRD12Q587J7 1177 aaKnown RBP25■■□□□ 1.59
TSEN54-201ENST00000333213 PPP1R13BQ96KQ4 1090 aa25■■□□□ 1.59
TSEN54-201ENST00000333213 SELPP16109 830 aa25■■□□□ 1.59
TSEN54-201ENST00000333213 ZSCAN20P17040 1043 aaPredicted RBP25■■□□□ 1.59
TSEN54-201ENST00000333213 SGSM1Q2NKQ1 1148 aa25■■□□□ 1.59
TSEN54-201ENST00000333213 NT5DC4Q86YG4 428 aa25■■□□□ 1.59
TSEN54-201ENST00000333213 FAM71AQ8IYT1 594 aa25■■□□□ 1.59
TSEN54-201ENST00000333213 C18orf25Q96B23 403 aaPredicted RBP25■■□□□ 1.59
TSEN54-201ENST00000333213 TRAIPQ9BWF2 469 aa25■■□□□ 1.59
TSEN54-201ENST00000333213 ACP6Q9NPH0 428 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms