RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 USP20Q9Y2K6 914 aa13.75□□□□□ -0.21
VSTM4-202ENST00000332853 URGCPQ8TCY9 931 aa13.75□□□□□ -0.21
VSTM4-202ENST00000332853 PRMT1Q99873 361 aaKnown RBP13.75□□□□□ -0.21
VSTM4-202ENST00000332853 ARHGAP20Q9P2F6 1191 aa13.75□□□□□ -0.21
VSTM4-202ENST00000332853 FAM198AQ9UFP1 575 aa13.75□□□□□ -0.21
VSTM4-202ENST00000332853 GGT7Q9UJ14 662 aa13.75□□□□□ -0.21
VSTM4-202ENST00000332853 KNDC1Q76NI1 1749 aa13.75□□□□□ -0.21
VSTM4-202ENST00000332853 MAPK13O15264 365 aa13.75□□□□□ -0.21
VSTM4-202ENST00000332853 XPAP23025 273 aaPredicted RBP13.75□□□□□ -0.21
VSTM4-202ENST00000332853 SLC8A1P32418 973 aa13.75□□□□□ -0.21
VSTM4-202ENST00000332853 MDM2Q00987 491 aaPredicted RBP13.75□□□□□ -0.21
VSTM4-202ENST00000332853 KLHL38Q2WGJ6 581 aa13.75□□□□□ -0.21
VSTM4-202ENST00000332853 IER5Q5VY09 327 aa13.75□□□□□ -0.21
VSTM4-202ENST00000332853 ZNF710Q8N1W2 664 aa13.75□□□□□ -0.21
VSTM4-202ENST00000332853 PRPF31Q8WWY3 499 aaKnown RBP13.75□□□□□ -0.21
VSTM4-202ENST00000332853 CLCN3P51790 818 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 RASSF3Q86WH2 238 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 SLC16A10Q8TF71 515 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 METTL5Q9NRN9 209 aaKnown RBP13.74□□□□□ -0.21
VSTM4-202ENST00000332853 PGM5Q15124 567 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 IL17AQ16552 155 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 ATG16L1Q676U5 607 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 C1orf131Q8NDD1 294 aaKnown RBP13.74□□□□□ -0.21
VSTM4-202ENST00000332853 C9orf72Q96LT7 481 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 MTMR12Q9C0I1 747 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 TXLNGQ9NUQ3 528 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 KLK14Q9P0G3 267 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 CELF2O95319 508 aaKnown RBP13.74□□□□□ -0.21
VSTM4-202ENST00000332853 NLRP11P59045 1033 aaKnown RBP13.74□□□□□ -0.21
VSTM4-202ENST00000332853 GLRA4Q5JXX5 417 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 NT5DC1Q5TFE4 455 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 JAMLQ86YT9 394 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 CFLARO15519 480 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 CSDE1O75534 798 aaKnown RBP13.74□□□□□ -0.21
VSTM4-202ENST00000332853 ESRRAP11474 423 aaPredicted RBP13.74□□□□□ -0.21
VSTM4-202ENST00000332853 MUM1L1Q5H9M0 696 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 LRRN4CLQ8ND94 238 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 CPB2Q96IY4 423 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 BCAP29Q9UHQ4 241 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 EML1O00423 815 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 HIF1AQ16665 826 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 TRAPPC11Q7Z392 1133 aa13.74□□□□□ -0.21
VSTM4-202ENST00000332853 ZNF571Q7Z3V5 609 aaPredicted RBP13.74□□□□□ -0.21
VSTM4-202ENST00000332853 PARK7Q99497 189 aaKnown RBP13.74□□□□□ -0.21
VSTM4-202ENST00000332853 HBP1O60381 514 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 OPHN1O60890 802 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 HSPA4LO95757 839 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 SUPT20HL2P0C7V6 817 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 GRIK1P39086 918 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 RBBP5Q15291 538 aaKnown RBP13.73□□□□□ -0.21
VSTM4-202ENST00000332853 KYAT1Q16773 422 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 CRLF3Q8IUI8 442 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 GLIS3Q8NEA6 775 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.73□□□□□ -0.21
VSTM4-202ENST00000332853 SLC20A1Q8WUM9 679 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 AGAP3Q96P47 875 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 DUSP9Q99956 384 aaKnown RBP13.73□□□□□ -0.21
VSTM4-202ENST00000332853 SLITRK3O94933 977 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 VTNP04004 478 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 XRRA1Q6P2D8 792 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 SCFD2Q8WU76 684 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 ZIM3Q96PE6 472 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 VIL1P09327 827 aaKnown RBP13.73□□□□□ -0.21
VSTM4-202ENST00000332853 SLC47A2Q86VL8 602 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 DHX38Q92620 1227 aaKnown RBP13.73□□□□□ -0.21
VSTM4-202ENST00000332853 NCAPGQ9BPX3 1015 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 OSGEPQ9NPF4 335 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 MRC1P22897 1456 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 CLGNO14967 610 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 ATP9BO43861 1147 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 RAP1GAPP47736 663 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 CUL2Q13617 745 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 LY6KQ17RY6 165 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 GOLGA7BQ2TAP0 167 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 TNIP3Q96KP6 325 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 BLOC1S4Q9NUP1 217 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 PPARGC1AQ9UBK2 798 aaKnown RBP13.73□□□□□ -0.21
VSTM4-202ENST00000332853 WNT7AO00755 349 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 KRT38O76015 456 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 CYP2C9P11712 490 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 E2F4Q16254 413 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 PID1Q7Z2X4 250 aa13.73□□□□□ -0.21
VSTM4-202ENST00000332853 TSR3Q9UJK0 312 aaKnown RBP13.73□□□□□ -0.21
VSTM4-202ENST00000332853 CCDC78A2IDD5 438 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 CPB1P15086 417 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 MAP2K2P36507 400 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 CDKL3Q8IVW4 592 aaPredicted RBP13.72□□□□□ -0.21
VSTM4-202ENST00000332853 CASZ1Q86V15 1759 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 P4HA2O15460 535 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 MAGEB2O15479 319 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 DDNO94850 711 aaPredicted RBP13.72□□□□□ -0.21
VSTM4-202ENST00000332853 SESN2P58004 480 aaPredicted RBP13.72□□□□□ -0.21
VSTM4-202ENST00000332853 DBN1Q16643 649 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 TMEM119Q4V9L6 283 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 MAP3K21Q5TCX8 1036 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 ACAD10Q6JQN1 1059 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 OTOP1Q7RTM1 612 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 ATP11CQ8NB49 1132 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 HPDLQ96IR7 371 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 PDCD2LQ9BRP1 358 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms