RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 PLA2G4AP47712 749 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 EPHB4P54760 987 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 NOP14P78316 857 aaKnown RBP9.68□□□□□ -0.86
SIMC1-201ENST00000332772 CENPCQ03188 943 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 ACVR2BQ13705 512 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 NCOA4Q13772 614 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 DGKDQ16760 1214 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 GLIPR1L2Q4G1C9 344 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 APBB1IPQ7Z5R6 666 aaPredicted RBP9.68□□□□□ -0.86
SIMC1-201ENST00000332772 PALB2Q86YC2 1186 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 LRRC71Q8N4P6 559 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 ARHGEF26Q96DR7 871 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 LRRC1Q9BTT6 524 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 RNPEPQ9H4A4 650 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 ASB7Q9H672 318 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 OSGEPQ9NPF4 335 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 GDF3Q9NR23 364 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 RBM12Q9NTZ6 932 aaKnown RBP9.68□□□□□ -0.86
SIMC1-201ENST00000332772 Q9Y3F1 56 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 ALG6Q9Y672 507 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 PTPRJQ12913 1337 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 CCDC66A2RUB6 948 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 BHMG1C9JSJ3 638 aaPredicted RBP9.68□□□□□ -0.86
SIMC1-201ENST00000332772 H3BRB1 525 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 CEP104O60308 925 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 SASH3O75995 380 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 KRT5P13647 590 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 CTNNA2P26232 953 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 SLC1A1P43005 524 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 ZNF132P52740 706 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 CASP8Q14790 479 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 MORN1Q5T089 497 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 MTHFD1LQ6UB35 978 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 CD302Q8IX05 232 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 AENQ8WTP8 325 aaKnown RBP9.68□□□□□ -0.86
SIMC1-201ENST00000332772 AFG1LQ8WV93 481 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 CAVIN3Q969G5 261 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 ANKRD36BP1Q96IX9 119 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 PTPN18Q99952 460 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 PLVAPQ9BX97 442 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 ZNF518BQ9C0D4 1074 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 TUT1Q9H6E5 874 aaKnown RBP9.68□□□□□ -0.86
SIMC1-201ENST00000332772 IFT122Q9HBG6 1241 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 MED4Q9NPJ6 270 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.68□□□□□ -0.86
SIMC1-201ENST00000332772 COG5Q9UP83 839 aa9.68□□□□□ -0.86
SIMC1-201ENST00000332772 INO80B-WBP1J3KQ70 363 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 LSM8O95777 96 aaKnown RBP9.67□□□□□ -0.86
SIMC1-201ENST00000332772 TNNC2P02585 160 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 MMP3P08254 477 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 ATICP31939 592 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 ADCYAP1R1P41586 468 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 AARSP49588 968 aaKnown RBP eCLIP9.67□□□□□ -0.86
SIMC1-201ENST00000332772 WNT7BP56706 349 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 CBX1P83916 185 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 SMC1AQ14683 1233 aaKnown RBP9.67□□□□□ -0.86
SIMC1-201ENST00000332772 ZNF568Q3ZCX4 644 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 MAATS1Q7Z4T9 603 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 PHF13Q86YI8 300 aaPredicted RBP9.67□□□□□ -0.86
SIMC1-201ENST00000332772 EFCAB13Q8IY85 973 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 MCOLN2Q8IZK6 566 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 TTC39CQ8N584 583 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 OR5B17Q8NGF7 314 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 CCDC26Q8TAB7 109 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 MS4A14Q96JA4 679 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 RUNDC3BQ96NL0 473 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 PSMB7Q99436 277 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 PI4K2AQ9BTU6 479 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 INO80BQ9C086 356 aaPredicted RBP9.67□□□□□ -0.86
SIMC1-201ENST00000332772 NIF3L1Q9GZT8 377 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 VRTNQ9H8Y1 702 aa9.67□□□□□ -0.86
SIMC1-201ENST00000332772 RPF1Q9H9Y2 349 aaKnown RBP9.67□□□□□ -0.86
SIMC1-201ENST00000332772 APOBEC3GQ9HC16 384 aaKnown RBP9.67□□□□□ -0.86
SIMC1-201ENST00000332772 PACSIN2Q9UNF0 486 aaPredicted RBP9.67□□□□□ -0.86
SIMC1-201ENST00000332772 GOLGA6L10A0A0M3HER8 536 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 A6NJR5 290 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 STAU1O95793 577 aaKnown RBP9.66□□□□□ -0.86
SIMC1-201ENST00000332772 SMPD1P17405 629 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 PTP4A2Q12974 167 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 MAP2K5Q13163 448 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 PAK2Q13177 524 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 TRPC3Q13507 836 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 CUL1Q13616 776 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 AMHR2Q16671 573 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 ZBTB41Q5SVQ8 909 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 LIN9Q5TKA1 542 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 OLFML2BQ68BL8 750 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 ZNF564Q8TBZ8 553 aaPredicted RBP9.66□□□□□ -0.86
SIMC1-201ENST00000332772 CD101Q93033 1021 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 ZNF653Q96CK0 615 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 NLRP4Q96MN2 994 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 TSPAN18Q96SJ8 248 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 ZSWIM1Q9BR11 485 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 CDT1Q9H211 546 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 RRAGCQ9HB90 399 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 MRPL47Q9HD33 250 aaKnown RBP9.66□□□□□ -0.86
SIMC1-201ENST00000332772 DMGDHQ9UI17 866 aaKnown RBP9.66□□□□□ -0.86
SIMC1-201ENST00000332772 NOC2LQ9Y3T9 749 aaKnown RBP9.66□□□□□ -0.86
SIMC1-201ENST00000332772 NUB1Q9Y5A7 615 aa9.66□□□□□ -0.86
SIMC1-201ENST00000332772 PCDHB4Q9Y5E5 795 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms