RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 ELMO3Q96BJ8 720 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 SCLYQ96I15 445 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 NT5C1BQ96P26 610 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 BAG1Q99933 345 aaPredicted RBP13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 RGS18Q9NS28 235 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 SIX4Q9UIU6 781 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 DNAJC12Q9UKB3 198 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 PLAGL2Q9UPG8 496 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 SMIM28A0A1B0GU29 152 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 C9IYK1 514 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 F8VZ95 297 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 PARNO95453 639 aaKnown RBP13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 ASS1P00966 412 aaKnown RBP13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 CST3P01034 146 aaPredicted RBP13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 CXCL10P02778 98 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 SKILP12757 684 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 ITGA4P13612 1032 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 CYP2C18P33260 490 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 GUCY2FP51841 1108 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 CCL23P55773 120 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 MYL6P60660 151 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 NOP14P78316 857 aaKnown RBP13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 ZBTB6Q15916 424 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 MEA1Q16626 185 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 WDR59Q6PJI9 974 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 AGMOQ6ZNB7 445 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 ZNF598Q86UK7 904 aaKnown RBP13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 RTN4RL1Q86UN2 441 aaPredicted RBP13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 DBF4BQ8NFT6 615 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 LPPQ93052 612 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 ZFP42Q96MM3 310 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 SPAG5Q96R06 1193 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 TSPAN18Q96SJ8 248 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 FTHL17Q9BXU8 183 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 GPR88Q9GZN0 384 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 TSPYL2Q9H2G4 693 aaPredicted RBP13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 APOBEC3GQ9HC16 384 aaKnown RBP13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 C1orf112Q9NSG2 853 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 TMEM39AQ9NV64 488 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 MYO6Q9UM54 1294 aa13.02□□□□□ -0.33
TRIM49B-201ENST00000332682 ALPK3Q96L96 1907 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 PTGESO14684 152 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 ITGB3P05106 788 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 SKIP12755 728 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 MLH1P40692 756 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 GCNT1Q02742 428 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 TCTN1Q2MV58 587 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 WDR44Q5JSH3 913 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 SPOPLQ6IQ16 392 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 SLC24A5Q71RS6 500 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 ECHDC2Q86YB7 292 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 PPM1KQ8N3J5 372 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 GSTCDQ8NEC7 633 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 SEPT8Q92599 483 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 SYN2Q92777 582 aaPredicted RBP13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 KAT5Q92993 513 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 TATDN2Q93075 761 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 C18orf25Q96B23 403 aaPredicted RBP13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 KREMEN1Q96MU8 473 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 STK33Q9BYT3 514 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 XYLT2Q9H1B5 865 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 NUCKS1Q9H1E3 243 aaKnown RBP13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 UBE2TQ9NPD8 197 aaPredicted RBP13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 RNF19AQ9NV58 838 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 DPP3Q9NY33 737 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 TUBGCP4Q9UGJ1 667 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 ITGA11Q9UKX5 1188 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 ZKSCAN5Q9Y2L8 839 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 GIT1Q9Y2X7 761 aa13.01□□□□□ -0.33
TRIM49B-201ENST00000332682 NRDCO43847 1150 aa13□□□□□ -0.33
TRIM49B-201ENST00000332682 KRT19P08727 400 aa13□□□□□ -0.33
TRIM49B-201ENST00000332682 PNMA6AP0CW24 399 aaPredicted RBP13□□□□□ -0.33
TRIM49B-201ENST00000332682 TRPC3Q13507 836 aa13□□□□□ -0.33
TRIM49B-201ENST00000332682 DRAP1Q14919 205 aaPredicted RBP13□□□□□ -0.33
TRIM49B-201ENST00000332682 SFMBT2Q5VUG0 894 aa13□□□□□ -0.33
TRIM49B-201ENST00000332682 FAM43BQ6ZT52 329 aaPredicted RBP13□□□□□ -0.33
TRIM49B-201ENST00000332682 GPIHBP1Q8IV16 184 aa13□□□□□ -0.33
TRIM49B-201ENST00000332682 APBB2Q92870 758 aa13□□□□□ -0.33
TRIM49B-201ENST00000332682 PPP1R10Q96QC0 940 aaKnown RBP13□□□□□ -0.33
TRIM49B-201ENST00000332682 GAD1Q99259 594 aa13□□□□□ -0.33
TRIM49B-201ENST00000332682 ARID3AQ99856 593 aa13□□□□□ -0.33
TRIM49B-201ENST00000332682 IMPG2Q9BZV3 1241 aa13□□□□□ -0.33
TRIM49B-201ENST00000332682 AIPL1Q9NZN9 384 aa13□□□□□ -0.33
TRIM49B-201ENST00000332682 PYCARDQ9ULZ3 195 aa13□□□□□ -0.33
TRIM49B-201ENST00000332682 UBQLN1Q9UMX0 589 aaKnown RBP13□□□□□ -0.33
TRIM49B-201ENST00000332682 NUB1Q9Y5A7 615 aa13□□□□□ -0.33
TRIM49B-201ENST00000332682 SCN1AP35498 2009 aa13□□□□□ -0.33
TRIM49B-201ENST00000332682 MICAL3Q7RTP6 2002 aa13□□□□□ -0.33
TRIM49B-201ENST00000332682 TRIM43BA6NCK2 446 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 ARL5CA6NH57 179 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 SOWAHDA6NJG2 315 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 KIAA0355O15063 1070 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 POLR2BP30876 1174 aaKnown RBP12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 AFF1P51825 1210 aaKnown RBP12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 MFAP3P55082 362 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 FAM189BP81408 668 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 CDK17Q00537 523 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 SOX4Q06945 474 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms