RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 LRIG3Q6UXM1 1119 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 RAPH1Q70E73 1250 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 GPD1LQ8N335 351 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 VPS11Q9H270 941 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 VCPKMTQ9H867 229 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 NRBP2Q9NSY0 501 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 SEL1LQ9UBV2 794 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 XRN1Q8IZH2 1706 aaKnown RBP10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 SPATA31A5Q5VU36 1347 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 SPATA31A7Q8IWB4 1347 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 PRPSAP2O60256 369 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ARFIP2P53365 341 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ALDH18A1P54886 795 aaKnown RBP10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 AGBL2Q5U5Z8 902 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 PPP4R1Q8TF05 950 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 TRIM55Q9BYV6 548 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 VCXQ9H320 206 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 KIF9Q9HAQ2 790 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 TUFT1Q9NNX1 390 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 SLCO1B3Q9NPD5 702 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 RGPD2P0DJD1 1756 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 UBE4BO95155 1302 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ANKRD63C9JTQ0 380 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 PJA2O43164 708 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 CDH16O75309 829 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 CBX6O95503 412 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 GH1P01241 217 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 NR3C2P08235 984 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 SPATA31C1P0DKV0 1188 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ORC2Q13416 577 aaPredicted RBP10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ZNF568Q3ZCX4 644 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 FAM160B2Q86V87 743 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 FUKQ8N0W3 1084 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 LRRC43Q8N309 656 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 FAM71DQ8N9W8 422 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ZKSCAN4Q969J2 545 aaPredicted RBP10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 GJD4Q96KN9 370 aaPredicted RBP10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 MXRA8Q9BRK3 442 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ADPGKQ9BRR6 497 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 TRPC5Q9UL62 973 aaPredicted RBP10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 NFAT5O94916 1531 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ASTN1O14525 1302 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 SLC16A3O15427 465 aaKnown RBP10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 TGFB1I1O43294 461 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 LPXNO60711 386 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 LGR5O75473 907 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 HAUS5O94927 633 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 SSTR1P30872 391 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 CDR2Q01850 454 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 HIF1AQ16665 826 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ANKRD20A8PQ5CZ79 823 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 OTOP1Q7RTM1 612 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 NETO2Q8NC67 525 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 OR6B3Q8NGW1 331 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 GSDMBQ8TAX9 411 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 MED10Q9BTT4 135 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 MKNK1Q9BUB5 465 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ATP6V0A4Q9HBG4 840 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 RAB6BQ9NRW1 208 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 GPATCH2LQ9NWQ4 482 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 NAALADL1Q9UQQ1 740 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 SUGT1Q9Y2Z0 365 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 FAM208AQ9UK61 1670 aaKnown RBP10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 M0QYV0 167 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 PEX10O60683 326 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 CCND2P30279 289 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 CHKAP35790 457 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 SREBF1P36956 1147 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 NPTX2P47972 431 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ARL4CP56559 192 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 LMNB2Q03252 620 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 DDR1Q08345 913 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 FOXD4Q12950 439 aaPredicted RBP10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 NCOA4Q13772 614 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ZNF667Q5HYK9 610 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 MIS18BP1Q6P0N0 1132 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 CDAN1Q8IWY9 1227 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 IL31RAQ8NI17 732 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 WDR18Q9BV38 432 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 KCTD10Q9H3F6 313 aa10.38□□□□□ -0.75
CSGALNACT1-201ENST00000332246 A6NJR5 290 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 PAX7P23759 505 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 PTENP60484 403 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 DRP2Q13474 957 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 CAPRIN2Q6IMN6 1127 aaKnown RBP10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 PRELID2Q8N945 189 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ANKRD36BP1Q96IX9 119 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 TRAIPQ9BWF2 469 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 FAM129AQ9BZQ8 928 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 DNAJC18Q9H819 358 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 LRRC4BQ9NT99 713 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 FAM49BQ9NUQ9 324 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 FAM47DPA6NHR8 397 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 A8MUI8 341 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 TRAPPC3O43617 180 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 KRT3P12035 628 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 AMHR2Q16671 573 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 GPAT2Q6NUI2 795 aa10.37□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ARHGAP24Q8N264 748 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms