RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 NR2F2P24468 414 aa22.7■■□□□ 1.22
YBX1-202ENST00000332220 CYP24A1Q07973 514 aa22.7■■□□□ 1.22
YBX1-202ENST00000332220 FUT10Q6P4F1 479 aa22.7■■□□□ 1.22
YBX1-202ENST00000332220 TAS1R1Q7RTX1 841 aa22.7■■□□□ 1.22
YBX1-202ENST00000332220 RNF168Q8IYW5 571 aaPredicted RBP22.7■■□□□ 1.22
YBX1-202ENST00000332220 VPS52Q8N1B4 723 aa22.7■■□□□ 1.22
YBX1-202ENST00000332220 GPR62Q9BZJ7 368 aa22.7■■□□□ 1.22
YBX1-202ENST00000332220 ZBP1Q9H171 429 aa22.7■■□□□ 1.22
YBX1-202ENST00000332220 PTPRJQ12913 1337 aa22.7■■□□□ 1.22
YBX1-202ENST00000332220 TMEM189-UBE2V1I3L0A0 370 aa22.69■■□□□ 1.22
YBX1-202ENST00000332220 PPEF2O14830 753 aa22.69■■□□□ 1.22
YBX1-202ENST00000332220 XPOTO43592 962 aaKnown RBP22.69■■□□□ 1.22
YBX1-202ENST00000332220 TADA2AO75478 443 aa22.69■■□□□ 1.22
YBX1-202ENST00000332220 LRPAP1P30533 357 aa22.69■■□□□ 1.22
YBX1-202ENST00000332220 STIM1Q13586 685 aa22.69■■□□□ 1.22
YBX1-202ENST00000332220 MYBPC2Q14324 1141 aa22.69■■□□□ 1.22
YBX1-202ENST00000332220 LMBRD2Q68DH5 695 aaPredicted RBP22.69■■□□□ 1.22
YBX1-202ENST00000332220 ANKRD40Q6AI12 368 aa22.69■■□□□ 1.22
YBX1-202ENST00000332220 KLHL10Q6JEL2 608 aa22.69■■□□□ 1.22
YBX1-202ENST00000332220 DCLRE1AQ6PJP8 1040 aa22.69■■□□□ 1.22
YBX1-202ENST00000332220 MICALL1Q8N3F8 863 aa22.69■■□□□ 1.22
YBX1-202ENST00000332220 BEST2Q8NFU1 509 aa22.69■■□□□ 1.22
YBX1-202ENST00000332220 PLEKHO2Q8TD55 490 aa22.69■■□□□ 1.22
YBX1-202ENST00000332220 DDX27Q96GQ7 796 aaKnown RBP22.69■■□□□ 1.22
YBX1-202ENST00000332220 MFSD14AQ96MC6 490 aa22.69■■□□□ 1.22
YBX1-202ENST00000332220 GZF1Q9H116 711 aaPredicted RBP22.69■■□□□ 1.22
YBX1-202ENST00000332220 STXBP5LQ9Y2K9 1186 aa22.69■■□□□ 1.22
YBX1-202ENST00000332220 PSMA7O14818 248 aa22.68■■□□□ 1.22
YBX1-202ENST00000332220 B3GAT3O94766 335 aa22.68■■□□□ 1.22
YBX1-202ENST00000332220 CCNE1P24864 410 aa22.68■■□□□ 1.22
YBX1-202ENST00000332220 RPL9P32969 192 aaKnown RBP22.68■■□□□ 1.22
YBX1-202ENST00000332220 PSMD6Q15008 389 aa22.68■■□□□ 1.22
YBX1-202ENST00000332220 EDRF1Q3B7T1 1238 aa22.68■■□□□ 1.22
YBX1-202ENST00000332220 PLPP4Q5VZY2 271 aa22.68■■□□□ 1.22
YBX1-202ENST00000332220 CEP135Q66GS9 1140 aa22.68■■□□□ 1.22
YBX1-202ENST00000332220 NT5DC4Q86YG4 428 aa22.68■■□□□ 1.22
YBX1-202ENST00000332220 AUTS2Q8WXX7 1259 aa22.68■■□□□ 1.22
YBX1-202ENST00000332220 DHTKD1Q96HY7 919 aaPredicted RBP22.68■■□□□ 1.22
YBX1-202ENST00000332220 TCF25Q9BQ70 676 aa22.68■■□□□ 1.22
YBX1-202ENST00000332220 HERC2P3Q9BVR0 1158 aa22.68■■□□□ 1.22
YBX1-202ENST00000332220 ENTPD7Q9NQZ7 604 aa22.68■■□□□ 1.22
YBX1-202ENST00000332220 CTNND2Q9UQB3 1225 aa22.68■■□□□ 1.22
YBX1-202ENST00000332220 COL6A3P12111 3177 aa22.68■■□□□ 1.22
YBX1-202ENST00000332220 SOD2P04179 222 aa22.67■■□□□ 1.22
YBX1-202ENST00000332220 PPP1R2P41236 205 aa22.67■■□□□ 1.22
YBX1-202ENST00000332220 BRCC3P46736 316 aa22.67■■□□□ 1.22
YBX1-202ENST00000332220 TFAMQ00059 246 aaKnown RBP22.67■■□□□ 1.22
YBX1-202ENST00000332220 SURF1Q15526 300 aa22.67■■□□□ 1.22
YBX1-202ENST00000332220 SCARA3Q6AZY7 606 aa22.67■■□□□ 1.22
YBX1-202ENST00000332220 RBM43Q6ZSC3 357 aaKnown RBP22.67■■□□□ 1.22
YBX1-202ENST00000332220 TMC7Q7Z402 723 aa22.67■■□□□ 1.22
YBX1-202ENST00000332220 ADGRD2Q7Z7M1 963 aa22.67■■□□□ 1.22
YBX1-202ENST00000332220 OR5B17Q8NGF7 314 aa22.67■■□□□ 1.22
YBX1-202ENST00000332220 NELFBQ8WX92 580 aa22.67■■□□□ 1.22
YBX1-202ENST00000332220 CCDC127Q96BQ5 260 aa22.67■■□□□ 1.22
YBX1-202ENST00000332220 EEF2KMTQ96G04 330 aa22.67■■□□□ 1.22
YBX1-202ENST00000332220 B3GALT6Q96L58 329 aa22.67■■□□□ 1.22
YBX1-202ENST00000332220 TSG101Q99816 390 aa22.67■■□□□ 1.22
YBX1-202ENST00000332220 DPP3Q9NY33 737 aa22.67■■□□□ 1.22
YBX1-202ENST00000332220 TMEM63CQ9P1W3 806 aa22.67■■□□□ 1.22
YBX1-202ENST00000332220 SF3B1O75533 1304 aaKnown RBP eCLIP22.66■■□□□ 1.229e-7■■■■■ 32.1
YBX1-202ENST00000332220 I3L4J1 428 aa22.66■■□□□ 1.22
YBX1-202ENST00000332220 AKAP3O75969 853 aa22.66■■□□□ 1.22
YBX1-202ENST00000332220 CTSAP10619 480 aa22.66■■□□□ 1.22
YBX1-202ENST00000332220 ADAM9Q13443 819 aa22.66■■□□□ 1.22
YBX1-202ENST00000332220 CCDC85BQ15834 202 aaPredicted RBP22.66■■□□□ 1.22
YBX1-202ENST00000332220 TIGD5Q53EQ6 642 aa22.66■■□□□ 1.22
YBX1-202ENST00000332220 TCEAL5Q5H9L2 206 aa22.66■■□□□ 1.22
YBX1-202ENST00000332220 C9orf57Q5W0N0 161 aa22.66■■□□□ 1.22
YBX1-202ENST00000332220 ZC3H3Q8IXZ2 948 aaKnown RBP22.66■■□□□ 1.22
YBX1-202ENST00000332220 MICAL1Q8TDZ2 1067 aa22.66■■□□□ 1.22
YBX1-202ENST00000332220 POP1Q99575 1024 aaKnown RBP22.66■■□□□ 1.22
YBX1-202ENST00000332220 MTMR12Q9C0I1 747 aa22.66■■□□□ 1.22
YBX1-202ENST00000332220 NSUN3Q9H649 340 aaKnown RBP22.66■■□□□ 1.22
YBX1-202ENST00000332220 INTS13Q9NVM9 706 aa22.66■■□□□ 1.22
YBX1-202ENST00000332220 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.66■■□□□ 1.22
YBX1-202ENST00000332220 PRUNE2Q8WUY3 3088 aa22.66■■□□□ 1.22
YBX1-202ENST00000332220 ANO9A1A5B4 782 aa22.65■■□□□ 1.22
YBX1-202ENST00000332220 HIDE1A8MVS5 230 aa22.65■■□□□ 1.22
YBX1-202ENST00000332220 DLATP10515 647 aaKnown RBP22.65■■□□□ 1.22
YBX1-202ENST00000332220 RPL13P26373 211 aaKnown RBP22.65■■□□□ 1.22
YBX1-202ENST00000332220 STX17P56962 302 aa22.65■■□□□ 1.22
YBX1-202ENST00000332220 LRRC63Q05C16 580 aa22.65■■□□□ 1.22
YBX1-202ENST00000332220 CCDC183Q5T5S1 534 aa22.65■■□□□ 1.22
YBX1-202ENST00000332220 TTI2Q6NXR4 508 aa22.65■■□□□ 1.22
YBX1-202ENST00000332220 WDR49Q8IV35 697 aa22.65■■□□□ 1.22
YBX1-202ENST00000332220 C1orf127Q8N9H9 656 aa22.65■■□□□ 1.22
YBX1-202ENST00000332220 MAFAQ8NHW3 353 aaPredicted RBP22.65■■□□□ 1.22
YBX1-202ENST00000332220 PPM1EQ8WY54 764 aa22.65■■□□□ 1.22
YBX1-202ENST00000332220 CGRRF1Q99675 332 aa22.65■■□□□ 1.22
YBX1-202ENST00000332220 DUSP9Q99956 384 aaKnown RBP22.65■■□□□ 1.22
YBX1-202ENST00000332220 FRMD4BQ9Y2L6 1034 aa22.65■■□□□ 1.22
YBX1-202ENST00000332220 PIRO00625 290 aa22.64■■□□□ 1.21
YBX1-202ENST00000332220 CXCL14O95715 111 aa22.64■■□□□ 1.21
YBX1-202ENST00000332220 TMEM191BP0C7N4 346 aa22.64■■□□□ 1.21
YBX1-202ENST00000332220 SMC1AQ14683 1233 aaKnown RBP22.64■■□□□ 1.21
YBX1-202ENST00000332220 PTPN14Q15678 1187 aa22.64■■□□□ 1.21
YBX1-202ENST00000332220 DPCR1Q3MIW9 517 aa22.64■■□□□ 1.21
YBX1-202ENST00000332220 FAM171A1Q5VUB5 890 aa22.64■■□□□ 1.21
YBX1-202ENST00000332220 PDE12Q6L8Q7 609 aaKnown RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms