RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 TAB2Q9NYJ8 693 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 IPPQ9Y573 584 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 ALPK3Q96L96 1907 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 RAG1P15918 1043 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 FMO5P49326 533 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 GPNMBQ14956 572 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 ZBTB6Q15916 424 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 ZBTB33Q86T24 672 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 ECHDC2Q86YB7 292 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 TTC39CQ8N584 583 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 SMG8Q8ND04 991 aaKnown RBP10.24□□□□□ -0.77
C11orf54-201ENST00000331239 ANKRD36BP1Q96IX9 119 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 UROC1Q96N76 676 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 ADAM2Q99965 735 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 NUCKS1Q9H1E3 243 aaKnown RBP10.24□□□□□ -0.77
C11orf54-201ENST00000331239 VPS16Q9H269 839 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 VRTNQ9H8Y1 702 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 ITGA11Q9UKX5 1188 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 UBQLN1Q9UMX0 589 aaKnown RBP10.24□□□□□ -0.77
C11orf54-201ENST00000331239 A0A1W2PQJ5 194 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 TISP43B9A030 160 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 TNNC2P02585 160 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 SLC10A6Q3KNW5 377 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 ZACNQ401N2 412 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 TEX35Q5T0J7 233 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 ENOSF1Q7L5Y1 443 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 NPAS4Q8IUM7 802 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 TMTC1Q8IUR5 882 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 PPP1R13LQ8WUF5 828 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 SAAL1Q96ER3 474 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 PPP1R16BQ96T49 567 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 ABHD10Q9NUJ1 306 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 FHOD1Q9Y613 1164 aa10.24□□□□□ -0.77
C11orf54-201ENST00000331239 HTTP42858 3142 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 TTC3P53804 2025 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 MICAL3Q7RTP6 2002 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 LRRIQ3A6PVS8 624 aaPredicted RBP10.23□□□□□ -0.77
C11orf54-201ENST00000331239 ENPP3O14638 875 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 ZRANB2O95218 330 aaKnown RBP eCLIP10.23□□□□□ -0.77
C11orf54-201ENST00000331239 C4BPAP04003 597 aaKnown RBP10.23□□□□□ -0.77
C11orf54-201ENST00000331239 PNMA6AP0CW24 399 aaPredicted RBP10.23□□□□□ -0.77
C11orf54-201ENST00000331239 RPL9P32969 192 aaKnown RBP10.23□□□□□ -0.77
C11orf54-201ENST00000331239 ACOT2P49753 483 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 UBXN1Q04323 297 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 RSRC2Q7L4I2 434 aaKnown RBP10.23□□□□□ -0.77
C11orf54-201ENST00000331239 THNSL1Q8IYQ7 743 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 GPR161Q8N6U8 529 aaKnown RBP10.23□□□□□ -0.77
C11orf54-201ENST00000331239 EHBP1Q8NDI1 1231 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 BEST2Q8NFU1 509 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 SPATA18Q8TC71 538 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 GOLGA1Q92805 767 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 DDX27Q96GQ7 796 aaKnown RBP10.23□□□□□ -0.77
C11orf54-201ENST00000331239 ZNF668Q96K58 619 aaPredicted RBP10.23□□□□□ -0.77
C11orf54-201ENST00000331239 IRX2Q9BZI1 471 aaPredicted RBP10.23□□□□□ -0.77
C11orf54-201ENST00000331239 TRIM43BA6NCK2 446 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 CAPN15O75808 1086 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 PNPLA4P41247 253 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 MXI1P50539 228 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 TMEM132DQ14C87 1099 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 C1orf220Q5T0J3 134 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 PSRC1Q6PGN9 363 aaPredicted RBP10.23□□□□□ -0.77
C11orf54-201ENST00000331239 CRIPAKQ8N1N5 446 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 FBXL13Q8NEE6 735 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 RABGGTAQ92696 567 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 TRIM43Q96BQ3 446 aaPredicted RBP10.23□□□□□ -0.77
C11orf54-201ENST00000331239 EIF2AQ9BY44 585 aaKnown RBP10.23□□□□□ -0.77
C11orf54-201ENST00000331239 MRPL9Q9BYD2 267 aaKnown RBP10.23□□□□□ -0.77
C11orf54-201ENST00000331239 NR2E3Q9Y5X4 410 aa10.23□□□□□ -0.77
C11orf54-201ENST00000331239 COL4A6Q14031 1691 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 ARHGEF37A1IGU5 675 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 GOLGA8IPA6NC78 632 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 GOLGA8JA6NMD2 632 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 LACTBL1A8MY62 500 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 CSDE1O75534 798 aaKnown RBP10.22□□□□□ -0.77
C11orf54-201ENST00000331239 TNNI1P19237 187 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 FGFR4P22455 802 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 LRPAP1P30533 357 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 CYP2C18P33260 490 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 MYL7Q01449 175 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 GRIK3Q13003 919 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 EXOC3L4Q17RC7 722 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 SGSM1Q2NKQ1 1148 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 EPC2Q52LR7 807 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 CYP26C1Q6V0L0 522 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 LRRC52Q8N7C0 313 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 DBF4BQ8NFT6 615 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 PHOSPHO2Q8TCD6 241 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 MTIF3Q9H2K0 278 aaKnown RBP10.22□□□□□ -0.77
C11orf54-201ENST00000331239 IKZF4Q9H2S9 585 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 STK39Q9UEW8 545 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 RECQL4O94761 1208 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 AMHP03971 560 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 ATF7P17544 494 aaPredicted RBP10.22□□□□□ -0.77
C11orf54-201ENST00000331239 RBP5P82980 135 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 TCERG1LQ5VWI1 586 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 SV2AQ7L0J3 742 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 RTN4RL1Q86UN2 441 aaPredicted RBP10.22□□□□□ -0.77
C11orf54-201ENST00000331239 ACRBPQ8NEB7 543 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 URGCPQ8TCY9 931 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 SYN2Q92777 582 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms