RNA–Protein interactions for RNA: ENST00000329314.5

TRIM61-201, Transcript of tripartite motif containing 61, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM61, Length 1,582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM61-201ENST00000329314 ATP8B3O60423 1300 aa20.04■□□□□ 0.8
TRIM61-201ENST00000329314 NFICP08651 508 aa20.04■□□□□ 0.8
TRIM61-201ENST00000329314 MGAT3Q09327 533 aa20.04■□□□□ 0.8
TRIM61-201ENST00000329314 TRPC3Q13507 836 aa20.04■□□□□ 0.8
TRIM61-201ENST00000329314 CUL2Q13617 745 aa20.04■□□□□ 0.8
TRIM61-201ENST00000329314 PTGISQ16647 500 aa20.04■□□□□ 0.8
TRIM61-201ENST00000329314 SCARA3Q6AZY7 606 aa20.04■□□□□ 0.8
TRIM61-201ENST00000329314 ALKBH5Q6P6C2 394 aaKnown RBP20.04■□□□□ 0.8
TRIM61-201ENST00000329314 FAM228AQ86W67 206 aa20.04■□□□□ 0.8
TRIM61-201ENST00000329314 LNX1Q8TBB1 728 aaPredicted RBP20.04■□□□□ 0.8
TRIM61-201ENST00000329314 TSKSQ9UJT2 592 aa20.04■□□□□ 0.8
TRIM61-201ENST00000329314 PIN4Q9Y237 131 aaKnown RBP20.04■□□□□ 0.8
TRIM61-201ENST00000329314 C2CD2Q9Y426 696 aa20.04■□□□□ 0.8
TRIM61-201ENST00000329314 NUB1Q9Y5A7 615 aa20.04■□□□□ 0.8
TRIM61-201ENST00000329314 CYP26A1O43174 497 aa20.03■□□□□ 0.8
TRIM61-201ENST00000329314 CASQ1P31415 396 aa20.03■□□□□ 0.8
TRIM61-201ENST00000329314 USP8P40818 1118 aa20.03■□□□□ 0.8
TRIM61-201ENST00000329314 MYL6P60660 151 aa20.03■□□□□ 0.8
TRIM61-201ENST00000329314 ZNF569Q5MCW4 686 aa20.03■□□□□ 0.8
TRIM61-201ENST00000329314 SMYD5Q6GMV2 418 aa20.03■□□□□ 0.8
TRIM61-201ENST00000329314 GLT1D1Q96MS3 346 aa20.03■□□□□ 0.8
TRIM61-201ENST00000329314 AGPAT1Q99943 283 aa20.03■□□□□ 0.8
TRIM61-201ENST00000329314 SENP6Q9GZR1 1112 aaPredicted RBP20.03■□□□□ 0.8
TRIM61-201ENST00000329314 NOC2LQ9Y3T9 749 aaKnown RBP20.03■□□□□ 0.8
TRIM61-201ENST00000329314 DUSP10Q9Y6W6 482 aa20.03■□□□□ 0.8
TRIM61-201ENST00000329314 FRMPD3Q5JV73 1810 aa20.03■□□□□ 0.8
TRIM61-201ENST00000329314 SGPL1O95470 568 aa20.02■□□□□ 0.8
TRIM61-201ENST00000329314 CHRNA1P02708 482 aa20.02■□□□□ 0.8
TRIM61-201ENST00000329314 TNFAIP3P21580 790 aa20.02■□□□□ 0.8
TRIM61-201ENST00000329314 PTK7Q13308 1070 aa20.02■□□□□ 0.8
TRIM61-201ENST00000329314 TMEM132DQ14C87 1099 aa20.02■□□□□ 0.8
TRIM61-201ENST00000329314 GLYCTKQ8IVS8 523 aa20.02■□□□□ 0.8
TRIM61-201ENST00000329314 C1orf127Q8N9H9 656 aa20.02■□□□□ 0.8
TRIM61-201ENST00000329314 EPS8L1Q8TE68 723 aa20.02■□□□□ 0.8
TRIM61-201ENST00000329314 DHX38Q92620 1227 aaKnown RBP20.02■□□□□ 0.8
TRIM61-201ENST00000329314 TAF4BQ92750 862 aa20.02■□□□□ 0.8
TRIM61-201ENST00000329314 ARID3AQ99856 593 aa20.02■□□□□ 0.8
TRIM61-201ENST00000329314 TRIM6Q9C030 488 aaPredicted RBP20.02■□□□□ 0.8
TRIM61-201ENST00000329314 SNTG2Q9NY99 539 aa20.02■□□□□ 0.8
TRIM61-201ENST00000329314 DERAQ9Y315 318 aa20.02■□□□□ 0.8
TRIM61-201ENST00000329314 ACO1P21399 889 aaKnown RBP20.01■□□□□ 0.79
TRIM61-201ENST00000329314 UBXN11Q5T124 520 aa20.01■□□□□ 0.79
TRIM61-201ENST00000329314 SLC35F6Q8N357 371 aa20.01■□□□□ 0.79
TRIM61-201ENST00000329314 ARRDC4Q8NCT1 418 aa20.01■□□□□ 0.79
TRIM61-201ENST00000329314 SNX27Q96L92 541 aa20.01■□□□□ 0.79
TRIM61-201ENST00000329314 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.01■□□□□ 0.79
TRIM61-201ENST00000329314 XYLT2Q9H1B5 865 aa20.01■□□□□ 0.79
TRIM61-201ENST00000329314 SIX4Q9UIU6 781 aa20.01■□□□□ 0.79
TRIM61-201ENST00000329314 NOCTQ9UK39 431 aaKnown RBP20.01■□□□□ 0.79
TRIM61-201ENST00000329314 CNTN6Q9UQ52 1028 aa20.01■□□□□ 0.79
TRIM61-201ENST00000329314 RALGAPA2Q2PPJ7 1873 aa20.01■□□□□ 0.79
TRIM61-201ENST00000329314 UMODL1Q5DID0 1318 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 CYP11B1P15538 503 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 YARSP54577 528 aaKnown RBP20■□□□□ 0.79
TRIM61-201ENST00000329314 NOP9Q86U38 636 aaKnown RBP20■□□□□ 0.79
TRIM61-201ENST00000329314 SLC47A2Q86VL8 602 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 SLC43A3Q8NBI5 491 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 CXorf38Q8TB03 319 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 SH3TC2Q8TF17 1288 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 U2AF1L4Q8WU68 220 aaKnown RBP20■□□□□ 0.79
TRIM61-201ENST00000329314 SLC20A1Q8WUM9 679 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 SECISBP2LQ93073 1101 aaKnown RBP20■□□□□ 0.79
TRIM61-201ENST00000329314 FAXDC2Q96IV6 333 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 INTUQ9ULD6 942 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 PTPN22Q9Y2R2 807 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 CITO14578 2027 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 BTNL10A8MVZ5 291 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 RPS6KA5O75582 802 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 KRT5P13647 590 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 THPOP40225 353 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 PDE6CP51160 858 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 ZNF699Q32M78 642 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 ALKAL1Q6UXT8 129 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 RPUSD2Q8IZ73 545 aaKnown RBP20■□□□□ 0.79
TRIM61-201ENST00000329314 RNF10Q8N5U6 811 aaKnown RBP20■□□□□ 0.79
TRIM61-201ENST00000329314 UBR7Q8N806 425 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 PACSIN1Q9BY11 444 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 NIF3L1Q9GZT8 377 aa20■□□□□ 0.79
TRIM61-201ENST00000329314 NXF3Q9H4D5 531 aaKnown RBP20■□□□□ 0.79
TRIM61-201ENST00000329314 HTTP42858 3142 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 A0A1W2PQ45 241 aaPredicted RBP19.99■□□□□ 0.79
TRIM61-201ENST00000329314 A0A1W2PQY0 241 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 MACROD2A1Z1Q3 448 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 ITGB3P05106 788 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 CTSHP09668 335 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 CHRNB2P17787 502 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 ATICP31939 592 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 TERF1P54274 439 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 BPIFB4P59827 614 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 TRIM71Q2Q1W2 868 aaKnown RBP19.99■□□□□ 0.79
TRIM61-201ENST00000329314 FAM26DQ5JW98 314 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 DDX1Q92499 740 aaKnown RBP19.99■□□□□ 0.79
TRIM61-201ENST00000329314 KIF12Q96FN5 646 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 VRTNQ9H8Y1 702 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 CHST12Q9NRB3 414 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 TRMT13Q9NUP7 481 aaKnown RBP19.99■□□□□ 0.79
TRIM61-201ENST00000329314 CNTN3Q9P232 1028 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 ITGA11Q9UKX5 1188 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 ST3GAL5Q9UNP4 418 aa19.99■□□□□ 0.79
TRIM61-201ENST00000329314 PHF24Q9UPV7 400 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms