RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 TCP11X1B4DZS4 312 aa20.12■□□□□ 0.81
SPSB1-201ENST00000328089 TLR3O15455 904 aaKnown RBP20.12■□□□□ 0.81
SPSB1-201ENST00000328089 CLTAP09496 248 aa20.12■□□□□ 0.81
SPSB1-201ENST00000328089 ATF2P15336 505 aa20.12■□□□□ 0.81
SPSB1-201ENST00000328089 HIRAP54198 1017 aaPredicted RBP20.12■□□□□ 0.81
SPSB1-201ENST00000328089 BYSLQ13895 437 aaKnown RBP20.12■□□□□ 0.81
SPSB1-201ENST00000328089 TMEM132BQ14DG7 1078 aa20.12■□□□□ 0.81
SPSB1-201ENST00000328089 CLEC16AQ2KHT3 1053 aa20.12■□□□□ 0.81
SPSB1-201ENST00000328089 TBC1D1Q86TI0 1168 aaPredicted RBP20.12■□□□□ 0.81
SPSB1-201ENST00000328089 VSIG10LQ86VR7 867 aa20.12■□□□□ 0.81
SPSB1-201ENST00000328089 MCOLN2Q8IZK6 566 aa20.12■□□□□ 0.81
SPSB1-201ENST00000328089 DDX1Q92499 740 aaKnown RBP20.12■□□□□ 0.81
SPSB1-201ENST00000328089 IWS1Q96ST2 819 aa20.12■□□□□ 0.81
SPSB1-201ENST00000328089 APOBEC3GQ9HC16 384 aaKnown RBP20.12■□□□□ 0.81
SPSB1-201ENST00000328089 ZNF148Q9UQR1 794 aa20.12■□□□□ 0.81
SPSB1-201ENST00000328089 MROH7Q68CQ1 1323 aa20.12■□□□□ 0.81
SPSB1-201ENST00000328089 TMEM120BA0PK00 339 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 PODXLO00592 558 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 KRT19P08727 400 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 AUHQ13825 339 aaKnown RBP20.11■□□□□ 0.81
SPSB1-201ENST00000328089 AGBL2Q5U5Z8 902 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 ANGEL2Q5VTE6 544 aaKnown RBP20.11■□□□□ 0.81
SPSB1-201ENST00000328089 THNSL1Q8IYQ7 743 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 HVCN1Q96D96 273 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 A1CFQ9NQ94 594 aaKnown RBP20.11■□□□□ 0.81
SPSB1-201ENST00000328089 CNOT7Q9UIV1 285 aaKnown RBP20.11■□□□□ 0.81
SPSB1-201ENST00000328089 GRIN3BO60391 1043 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 CTNNA2P26232 953 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 CYP4X1Q8N118 509 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 KIF2BQ8N4N8 673 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 HAPLN2Q9GZV7 340 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.11■□□□□ 0.81
SPSB1-201ENST00000328089 COL4A5P29400 1685 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 ZNF541Q9H0D2 1346 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 GZMAP12544 262 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 DRD4P21917 467 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 TFAMQ00059 246 aaKnown RBP20.11■□□□□ 0.81
SPSB1-201ENST00000328089 TXNRD3NBQ6F5E7 133 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 HIBCHQ6NVY1 386 aaPredicted RBP20.11■□□□□ 0.81
SPSB1-201ENST00000328089 TEPSINQ96N21 525 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 R3HDMLQ9H3Y0 253 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 ATP6V0A4Q9HBG4 840 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 SLC40A1Q9NP59 571 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 BAIAP2L1Q9UHR4 511 aa20.11■□□□□ 0.81
SPSB1-201ENST00000328089 CST3P01034 146 aaPredicted RBP20.1■□□□□ 0.81
SPSB1-201ENST00000328089 EDN1P05305 212 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 CD19P15391 556 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 EMC2Q15006 297 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 TMED2Q15363 201 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 SIX1Q15475 284 aaPredicted RBP20.1■□□□□ 0.81
SPSB1-201ENST00000328089 EXOC3L1Q86VI1 746 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 NSUN6Q8TEA1 469 aaKnown RBP20.1■□□□□ 0.81
SPSB1-201ENST00000328089 LRRN4Q8WUT4 740 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 SEC14L1Q92503 715 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 CD101Q93033 1021 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 RPS6KC1Q96S38 1066 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 FHDC1Q9C0D6 1143 aaPredicted RBP20.1■□□□□ 0.81
SPSB1-201ENST00000328089 KIAA1683Q9H0B3 1180 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 ADAM7Q9H2U9 754 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 SAMD15Q9P1V8 674 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 NUB1Q9Y5A7 615 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 A6NNZ2 444 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 CYP1A2P05177 515 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 PSAPP07602 524 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 KCNA3P22001 575 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 NRLP54845 237 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 EIF3BP55884 814 aaKnown RBP20.1■□□□□ 0.81
SPSB1-201ENST00000328089 TUBB8Q3ZCM7 444 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 DCUN1D2Q6PH85 259 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 FAM83AQ86UY5 434 aa20.1■□□□□ 0.81
SPSB1-201ENST00000328089 DIS3Q9Y2L1 958 aaKnown RBP20.1■□□□□ 0.81
SPSB1-201ENST00000328089 F8VP50 259 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 RFX1P22670 979 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 CCDC197Q8NCU1 140 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 TRAPPC12Q8WVT3 735 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.09■□□□□ 0.812e-7■■■■■ 78.5
SPSB1-201ENST00000328089 LPAR1Q92633 364 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 ZWILCHQ9H900 591 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 KIF9Q9HAQ2 790 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 ABCF3Q9NUQ8 709 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 MAP3K6O95382 1288 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 GPC3P51654 580 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 ALCAMQ13740 583 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 PPP1R13LQ8WUF5 828 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 MCEEQ96PE7 176 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 AAASQ9NRG9 546 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 RNF19AQ9NV58 838 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 PCYOX1Q9UHG3 505 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 STK38LQ9Y2H1 464 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 GREB1LQ9C091 1923 aaPredicted RBP20.09■□□□□ 0.81
SPSB1-201ENST00000328089 LRRC37AA6NMS7 1700 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 SFNP31947 248 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 BACE1P56817 501 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 P3H1Q32P28 736 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 ERMARDQ5T6L9 678 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 FMNL3Q8IVF7 1028 aa20.09■□□□□ 0.81
SPSB1-201ENST00000328089 RBBP8NLQ8NC74 664 aaPredicted RBP20.09■□□□□ 0.81
SPSB1-201ENST00000328089 C1orf131Q8NDD1 294 aaKnown RBP20.09■□□□□ 0.81
SPSB1-201ENST00000328089 LBHD1Q9BQE6 289 aaPredicted RBP20.09■□□□□ 0.81
SPSB1-201ENST00000328089 TXLNGYQ9BZA5 131 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms