RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 TFE3P19532 575 aaPredicted RBP17.27■□□□□ 0.36
SMAD3-201ENST00000327367 SGO1Q5FBB7 561 aa17.27■□□□□ 0.36
SMAD3-201ENST00000327367 TMEM117Q9H0C3 514 aa17.27■□□□□ 0.36
SMAD3-201ENST00000327367 METTL5Q9NRN9 209 aaKnown RBP17.27■□□□□ 0.36
SMAD3-201ENST00000327367 CDH16O75309 829 aa17.27■□□□□ 0.36
SMAD3-201ENST00000327367 BMP3P12645 472 aa17.27■□□□□ 0.36
SMAD3-201ENST00000327367 RASGRF1Q13972 1273 aa17.27■□□□□ 0.36
SMAD3-201ENST00000327367 USP10Q14694 798 aaKnown RBP17.27■□□□□ 0.36
SMAD3-201ENST00000327367 THEMIS2Q5TEJ8 643 aa17.27■□□□□ 0.36
SMAD3-201ENST00000327367 JAMLQ86YT9 394 aa17.27■□□□□ 0.36
SMAD3-201ENST00000327367 WDR48Q8TAF3 677 aa17.27■□□□□ 0.36
SMAD3-201ENST00000327367 RUBCNQ92622 972 aa17.27■□□□□ 0.36
SMAD3-201ENST00000327367 ARHGEF10O15013 1369 aa17.27■□□□□ 0.36
SMAD3-201ENST00000327367 NANOGNBQ7Z5D8 188 aa17.27■□□□□ 0.35
SMAD3-201ENST00000327367 REXO4Q9GZR2 422 aaKnown RBP17.27■□□□□ 0.35
SMAD3-201ENST00000327367 SENP1Q9P0U3 644 aa17.27■□□□□ 0.35
SMAD3-201ENST00000327367 TMEM191CA6NGB0 347 aa17.27■□□□□ 0.35
SMAD3-201ENST00000327367 CACNB2Q08289 660 aaPredicted RBP17.27■□□□□ 0.35
SMAD3-201ENST00000327367 FOXR1Q6PIV2 292 aa17.27■□□□□ 0.35
SMAD3-201ENST00000327367 TLR2O60603 784 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 TCF3P15923 654 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 COPAP53621 1224 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 CYFIP1Q7L576 1253 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 ZNF579Q8NAF0 562 aaKnown RBP17.26■□□□□ 0.35
SMAD3-201ENST00000327367 UHRF1BP1Q6BDS2 1440 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 PNMA6FA0A0J9YX94 578 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 USP17L5A8MUK1 530 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 SERPIND1P05546 499 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 ABCE1P61221 599 aaKnown RBP17.26■□□□□ 0.35
SMAD3-201ENST00000327367 MROH9Q5TGP6 573 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 TTC30AQ86WT1 665 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 GPR101Q96P66 508 aaPredicted RBP17.26■□□□□ 0.35
SMAD3-201ENST00000327367 SP110Q9HB58 689 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 C5orf58C9J3I9 102 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 PCCAP05165 728 aaPredicted RBP17.26■□□□□ 0.35
SMAD3-201ENST00000327367 MAGEA4P43358 317 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 ARID3BQ8IVW6 561 aaPredicted RBP17.26■□□□□ 0.35
SMAD3-201ENST00000327367 SCN4BQ8IWT1 228 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 RAB6BQ9NRW1 208 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 NLRP11P59045 1033 aaKnown RBP17.26■□□□□ 0.35
SMAD3-201ENST00000327367 ACTR2P61160 394 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 UXS1Q8NBZ7 420 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 PRCCQ92733 491 aaPredicted RBP17.26■□□□□ 0.35
SMAD3-201ENST00000327367 SH3KBP1Q96B97 665 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 GPATCH8Q9UKJ3 1502 aaKnown RBP17.26■□□□□ 0.35
SMAD3-201ENST00000327367 ZNF23P17027 643 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 LPCAT2Q7L5N7 544 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 E2F7Q96AV8 911 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 PLEKHF1Q96S99 279 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 FAM49AQ9H0Q0 323 aaPredicted RBP17.26■□□□□ 0.35
SMAD3-201ENST00000327367 KDM4CQ9H3R0 1056 aa17.26■□□□□ 0.35
SMAD3-201ENST00000327367 KIAA0586Q9BVV6 1533 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 USP17L15C9J2P7 530 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 USP17L13C9JLJ4 530 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 USP17L11C9JVI0 530 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 USP17L18D6R9N7 530 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 USP17L22D6RA61 530 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 USP17L17D6RBQ6 530 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 USP17L19D6RCP7 530 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 USP17L20D6RJB6 530 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 USP17L24Q0WX57 530 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 USP17L6PQ6QN14 398 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 KDM7AQ6ZMT4 941 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 PCDHA6Q9UN73 950 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 AP4S1Q9Y587 144 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 PCDHA8Q9Y5H6 950 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 CIITAP33076 1130 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 GPC3P51654 580 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 SLC16A1P53985 500 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 MIGA2Q7L4E1 593 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 DDI1Q8WTU0 396 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 H2AFY2Q9P0M6 372 aaPredicted RBP17.25■□□□□ 0.35
SMAD3-201ENST00000327367 ASAP1Q9ULH1 1129 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 CDHR2Q9BYE9 1310 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 PADI6Q6TGC4 694 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 HOMEZQ8IX15 550 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 PARVAQ9NVD7 372 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 IL1RAPL1Q9NZN1 696 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 NFKBIL1Q9UBC1 381 aaPredicted RBP17.25■□□□□ 0.35
SMAD3-201ENST00000327367 SUPT3HB4E1H0 165 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 TPD52L2O43399 206 aaKnown RBP17.25■□□□□ 0.35
SMAD3-201ENST00000327367 ASNA1O43681 348 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 SASH1O94885 1247 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 HSMCR30P0CW71 290 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 SARSP49591 514 aaKnown RBP17.25■□□□□ 0.35
SMAD3-201ENST00000327367 SCUBE1Q8IWY4 988 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 TC2NQ8N9U0 490 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 FAM111AQ96PZ2 611 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 MAGEB5Q9BZ81 275 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 KLHL4Q9C0H6 718 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 IPPQ9Y573 584 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 ABCB11O95342 1321 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 AVPR1AP37288 418 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 RFC5P40937 340 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 GALCP54803 685 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 HES6Q96HZ4 224 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 PIF1Q9H611 641 aa17.25■□□□□ 0.35
SMAD3-201ENST00000327367 RPAP1Q9BWH6 1393 aaPredicted RBP17.25■□□□□ 0.35
SMAD3-201ENST00000327367 TOMM70O94826 608 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 KCNMA1Q12791 1236 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms