RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ATL2Q8NHH9 583 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 OLIG1Q8TAK6 271 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 MAIP1Q8WWC4 291 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 ART4Q93070 314 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 ATG4CQ96DT6 458 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 ZBTB45Q96K62 511 aaPredicted RBP13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 PCDHA10Q9Y5I2 948 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 ADAMTSL1Q8N6G6 1762 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 ITIH2P19823 946 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 DRG2P55039 364 aaKnown RBP13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 GTF2BQ00403 316 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 PLCB4Q15147 1175 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 CLEC16AQ2KHT3 1053 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 EMC10Q5UCC4 262 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 KCTD17Q8N5Z5 321 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 CCDC89Q8N998 374 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 HELQQ8TDG4 1101 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 ATP6V0A1Q93050 837 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 C10orf88Q9H8K7 445 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 TTC4O95801 387 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 SLC8A1P32418 973 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 LACTBP83111 547 aaPredicted RBP13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 CYP24A1Q07973 514 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 SETDB1Q15047 1291 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 NFIL3Q16649 462 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 HHATQ5VTY9 493 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 ARHGEF18Q6ZSZ5 1173 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 ANO5Q75V66 913 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 MCOLN2Q8IZK6 566 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 C3orf20Q8ND61 904 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 ZNF317Q96PQ6 595 aaPredicted RBP13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 HERPUD2Q9BSE4 406 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 TRAIPQ9BWF2 469 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 KDM4CQ9H3R0 1056 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 RPAP3Q9H6T3 665 aaPredicted RBP13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 ALG13Q9NP73 1137 aaKnown RBP13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 GJA3Q9Y6H8 435 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 NRAPQ86VF7 1730 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 GOLGA8RI6L899 631 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 CFHP08603 1231 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 ETS1P14921 441 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 ELF3P78545 371 aaPredicted RBP13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 KRT76Q01546 638 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 SNRNP48Q6IEG0 339 aaKnown RBP13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 ZBED8Q8IZ13 594 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 SUPT20HQ8NEM7 779 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 MORC4Q8TE76 937 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 STAMBPL1Q96FJ0 436 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 KLF6Q99612 283 aaPredicted RBP13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 PLCD4Q9BRC7 762 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 PDCD2LQ9BRP1 358 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 ADAM7Q9H2U9 754 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 ZWILCHQ9H900 591 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 NINJ2Q9NZG7 142 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 K7ERI5 159 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 KRT19P08727 400 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 PAEPP09466 180 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 CDC25CP30307 473 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 ARSEP51690 589 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 JAK3P52333 1124 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 PGM5Q15124 567 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 RHOT1Q8IXI2 618 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 NIM1KQ8IY84 436 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 FBF1Q8TES7 1133 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 MSTO1Q9BUK6 570 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 TARS2Q9BW92 718 aaKnown RBP13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 ETNK1Q9HBU6 452 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 RBAKQ9NYW8 714 aaPredicted RBP13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 CNOT7Q9UIV1 285 aaKnown RBP13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 AGO2Q9UKV8 859 aaKnown RBP13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 NAALADL1Q9UQQ1 740 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 ATXN2Q99700 1313 aaKnown RBP13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 CDK5RAP2Q96SN8 1893 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 SNX3O60493 162 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 CYP1A2P05177 515 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 NR3C2P08235 984 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 TAS2R40P59535 323 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 SMTNL2Q2TAL5 461 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 CYP4X1Q8N118 509 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 DCLK3Q9C098 648 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 KIF9Q9HAQ2 790 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 TELO2Q9Y4R8 837 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 PCDHB2Q9Y5E7 798 aa13.69□□□□□ -0.22
HMGCS1-201ENST00000325110 C5orf60A6NFR6 353 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 ATP2A1O14983 1001 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 DHX15O43143 795 aaKnown RBP13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 HSPA1LP34931 641 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 NLRP11P59045 1033 aaKnown RBP13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 IL9RQ01113 521 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 PRKCEQ02156 737 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 MYBPC2Q14324 1141 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 RSRC1Q96IZ7 334 aaKnown RBP13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 TXLNGYQ9BZA5 131 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 NXF1Q9UBU9 619 aaKnown RBP13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 GGA2Q9UJY4 613 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 WNK3Q9BYP7 1800 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 SRRM3A6NNA2 597 aaPredicted RBP13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 A8MUI8 341 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 ATP6V1G2O95670 118 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 MUTP22033 750 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms